BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0900.1
(918 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 94 2e-19
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 94 2e-19
AT4G00980.1 | zinc knuckle (CCHC-type) family protein | Chr4:422... 65 2e-10
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 62 5e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 95/160 (59%), Gaps = 3/160 (1%)
Query: 714 TYSVSKLSRFTSNPSKKHWTAIARVLRYLRQTKEYGLLYTKYPAV-LEGYADANWISDTD 772
+++V+KLS+F+ P H A+ ++L Y++ T GL Y+ + L+ ++DA++ S D
Sbjct: 396 SFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKD 455
Query: 773 DTKSTSGYVFTLGGAAISWKSSKQTCIARSTMDSEFIALDKAGEETKWLRHFLENIPIWT 832
+ST+GY LG + ISWKS KQ +++S+ ++E+ AL A +E WL F + +
Sbjct: 456 TRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL-P 514
Query: 833 KSVPAINIHCDNKTAIARTHSKMYNGKSQHIRRRHNTVKK 872
S P + + CDN AI + +++ +++HI ++V++
Sbjct: 515 LSKPTL-LFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 95/160 (59%), Gaps = 3/160 (1%)
Query: 714 TYSVSKLSRFTSNPSKKHWTAIARVLRYLRQTKEYGLLYTKYPAV-LEGYADANWISDTD 772
+++V+KLS+F+ P H A+ ++L Y++ T GL Y+ + L+ ++DA++ S D
Sbjct: 396 SFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKD 455
Query: 773 DTKSTSGYVFTLGGAAISWKSSKQTCIARSTMDSEFIALDKAGEETKWLRHFLENIPIWT 832
+ST+GY LG + ISWKS KQ +++S+ ++E+ AL A +E WL F + +
Sbjct: 456 TRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL-P 514
Query: 833 KSVPAINIHCDNKTAIARTHSKMYNGKSQHIRRRHNTVKK 872
S P + + CDN AI + +++ +++HI ++V++
Sbjct: 515 LSKPTL-LFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G00980.1 | zinc knuckle (CCHC-type) family protein |
Chr4:422732-424580 REVERSE LENGTH=488 | 201606
Length = 488
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 75 KKFIVGRFLDFKMVDSKPVITQVQEFQIIFQELKVESLVTNEAFQVQAMIEKLSPGWKDF 134
K+ V ++++F+MV+ +P++ QVQ F I + + +EAF V +I K P W+ F
Sbjct: 302 KRSQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPSWRGF 361
Query: 135 KNYLRHKNKDTSLEELILKLRIEEDSRTAEKKTEKSSNAPKVNVIEGGPKLKRKRSGREV 194
L + + L+ +++ EE+ K A + +E P L G +
Sbjct: 362 CTRLMEEEY-LPVWMLMERVKAEEELLRNGAKGVTYRPATGSSQMERTPSLGTTHRGSQS 420
Query: 195 GSEKSTKKSFD----VNCFNCGKKGHLSKDC-CSKNDK 227
K + D + C NCG+KGHL+K C SK+D+
Sbjct: 421 VGWKRKEPERDERVIIVCDNCGRKGHLAKHCWGSKSDE 458
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 61.6 bits (148), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 714 TYSVSKLSRFTSNPSKKHWTAIARVLRYLRQTKEYGLLYTKYPAV-LEGYADANWISDTD 772
+Y+V+ + + P+ + + RVLRY++ T +GL K + ++ + D++W T
Sbjct: 118 SYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTS 177
Query: 773 DTKSTSGYVFTLGGAAISWKSSKQTCIARSTMDSEFIALDKAGEETKW 820
+ST+G+ LG ISW + +Q ++RS+ ++E+ AL E W
Sbjct: 178 TRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225