BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1040.1
(152 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G41980.1 | nuclease | Chr5:16793765-16794889 FORWARD LENGTH=3... 99 5e-25
AT1G43722.1 | nuclease | Chr1:16496403-16497377 FORWARD LENGTH=3... 79 5e-18
AT5G28950.1 | nuclease | Chr5:10992505-10993435 FORWARD LENGTH=1... 69 4e-15
AT5G28730.1 | nuclease | Chr5:10779003-10780218 FORWARD LENGTH=2... 54 4e-09
>AT5G41980.1 | nuclease | Chr5:16793765-16794889 FORWARD LENGTH=374
| 201606
Length = 374
Score = 99.0 bits (245), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 2 LRMKIDTFNQLCSMLVAKEL-RPSRWVDVKEQVVIFLLTIGHDSRVRHNGFDLIRSSKAV 60
RM F +LC +L + L R + + ++ Q+ IFL IGH+ R R S + +
Sbjct: 46 FRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYSGETI 105
Query: 61 HRHFHNVLRFVLRLGPEVVKPTRESFFLEMGNRRGWPLTYFKDCVGTIDGTYIPTTVPVE 120
RHF+NVL V+ + + +P S LE + YFKDCVG +D +IP V V+
Sbjct: 106 SRHFNNVLNAVIAISKDFFQPNSNSDTLENDD------PYFKDCVGVVDSFHIPVMVGVD 159
Query: 121 DQPRYRNRKGDIRHNILVPCSFDMKITYVLAG 152
+Q +RN G + N+L SFD++ YVLAG
Sbjct: 160 EQGPFRNGNGLLTQNVLAASSFDLRFNYVLAG 191
>AT1G43722.1 | nuclease | Chr1:16496403-16497377 FORWARD LENGTH=324
| 201606
Length = 324
Score = 79.3 bits (194), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 1 MLRMKIDTFNQLCSMLVAK-ELRPSRWVDVKEQVVIFLLTIGHDSRVRHNGFDLIRSSKA 59
+LRM + F LC+ML +L+P+ + ++E V +FL GH+ R G R+ +
Sbjct: 69 LLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVYRDVGLRFGRNQET 128
Query: 60 VHRHFHNVLRFVLRLGPEVVK-PTRESFF-----LEMGNRRGWPLTYFKDCVGTIDGTYI 113
V R F VL L + ++ PTR+ + L++ ++R WP YF VG +DGT++
Sbjct: 129 VQRKFREVLTATELLACDYIRTPTRQELYRIPERLQV-DQRYWP--YFSGFVGAMDGTHV 185
Query: 114 PTTVPVEDQPRYRNRKGDIRHNILVPCSFDMKITYVLAG 152
V + Q Y NR + NI+ C M TY+ G
Sbjct: 186 CVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNG 224
>AT5G28950.1 | nuclease | Chr5:10992505-10993435 FORWARD LENGTH=148
| 201606
Length = 148
Score = 68.6 bits (166), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 100 YFKDCVGTIDGTYIPTTVPVEDQPRYRNRKGDIRHNILVPCSFDMKITYVLAG 152
YFKDCVG ID T+I V + P +RNRKGDI N+L C+FD++ YVL+G
Sbjct: 21 YFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSG 73
>AT5G28730.1 | nuclease | Chr5:10779003-10780218 FORWARD LENGTH=296
| 201606
Length = 296
Score = 53.9 bits (128), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 62/158 (39%), Gaps = 32/158 (20%)
Query: 1 MLRMKIDTFNQLCSMLVAK-ELRPSRWVDVKEQVVIFLLTIGHDSRVRHNGFDLIRSSKA 59
++RM + F QLC +L K L+ S + + E V IFL+ + R + +
Sbjct: 27 LIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDIALRFGHAQET 86
Query: 60 VHRHFHNVLRFVLRLGPEVVKPTRESFFLEMGNR-----RGWPLTYFKDCVGTIDGTYIP 114
+ R FH+VL+ + RL E ++P + + NR R WP + D +G
Sbjct: 87 IWRKFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRYWP--FLMDLLGI------- 137
Query: 115 TTVPVEDQPRYRNRKGDIRHNILVPCSFDMKITYVLAG 152
N+L C DM TY G
Sbjct: 138 -----------------ASFNVLAICDLDMLFTYCFVG 158