BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1110.1
(215 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 108 5e-27
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 108 5e-27
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 76 1e-16
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 52 9e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 108 bits (270), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 1 MYIINCTRPDIAYAVSRLSRYTYNPGQTHWDALIKVLRYLKYTLSHSLHYSRYPAV-LEG 59
MY+ TR DI++AV++LS+++ P H A++K+L Y+K T+ L YS + L+
Sbjct: 386 MYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV 444
Query: 60 YTDANWISDSEESKSTSGFVFTLAGAAVAWKSSKQTCIARSTMESEFIALDKAAEEAEWI 119
++DA++ S + +ST+G+ L + ++WKS KQ +++S+ E+E+ AL A +E W+
Sbjct: 445 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504
Query: 120 RSFLDDIPIWPKPMPSILIHCDSTAAIAKAKNNIYNGKSRHIRRRHNSIKQ 170
F ++ + P P++L CD+TAAI A N +++ +++HI +S+++
Sbjct: 505 AQFFRELQL-PLSKPTLLF-CDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 108 bits (270), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Query: 1 MYIINCTRPDIAYAVSRLSRYTYNPGQTHWDALIKVLRYLKYTLSHSLHYSRYPAV-LEG 59
MY+ TR DI++AV++LS+++ P H A++K+L Y+K T+ L YS + L+
Sbjct: 386 MYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV 444
Query: 60 YTDANWISDSEESKSTSGFVFTLAGAAVAWKSSKQTCIARSTMESEFIALDKAAEEAEWI 119
++DA++ S + +ST+G+ L + ++WKS KQ +++S+ E+E+ AL A +E W+
Sbjct: 445 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504
Query: 120 RSFLDDIPIWPKPMPSILIHCDSTAAIAKAKNNIYNGKSRHIRRRHNSIKQ 170
F ++ + P P++L CD+TAAI A N +++ +++HI +S+++
Sbjct: 505 AQFFRELQL-PLSKPTLLF-CDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 76.3 bits (186), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 4 INCTRPDIAYAVSRLSRYTYNPGQTHWDALIKVLRYLKYTLSHSLHYSRYPAV-LEGYTD 62
+ TRPDI+YAV+ + + + P +D L +VLRY+K T+ H L+ + + ++ + D
Sbjct: 110 LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 169
Query: 63 ANWISDSEESKSTSGFVFTLAGAAVAWKSSKQTCIARSTMESEFIALDKAAEEAEW 118
++W + +ST+GF L ++W + +Q ++RS+ E+E+ AL A E W
Sbjct: 170 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 52.0 bits (123), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 1 MYIINCTRPDIAYAVSRLSRYTYNPGQTHWDALIKVLRYLKYTLSHSLHYSRYPAV-LEG 59
MY+ TRPD+ +AV+RLS+++ A+ KVL Y+K T+ L YS + L+
Sbjct: 1 MYL-TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 60 YTDANWISDSEESKSTSGF 78
+ D++W S + +S +GF
Sbjct: 60 FADSDWASCPDTRRSVTGF 78