BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000108.1_g1200.1
         (126 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATMG01250.1 | RNA-directed DNA polymerase (reverse transcriptase...    52   2e-09
AT4G20520.1 | RNA binding / RNA-directed DNA polymerase | Chr4:1...    50   5e-08

>ATMG01250.1 | RNA-directed DNA polymerase (reverse transcriptase) |
           ChrM:310514-310882 FORWARD LENGTH=122 | 201606
          Length = 122

 Score = 52.0 bits (123), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 6/65 (9%)

Query: 66  LVNGRPGNTFYPSRGIRQGDPLSPFLFTLATE---GLSRKLMANNNCDAPCPKIDTTTPR 122
           ++NG P     PSRG+RQGDPLSP+LF L TE   GL R+  A      P  ++   +PR
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRR--AQEQGRLPGIRVSNNSPR 70

Query: 123 -NYLL 126
            N+LL
Sbjct: 71  INHLL 75


>AT4G20520.1 | RNA binding / RNA-directed DNA polymerase |
           Chr4:11045912-11047716 FORWARD LENGTH=376 | 201606
          Length = 376

 Score = 50.4 bits (119), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 5/93 (5%)

Query: 3   QEIIHSFKKMKGAIGYFGLKLDMSIAFDRTEWKFLIDITKHLGYDEHWIKMIHTCISTSS 62
           QE +HS ++ KG  G+  LKLD+  A+DR  W +L D     G+ E W+  I      + 
Sbjct: 34  QEAVHSMRRKKGVKGWMLLKLDLEKAYDRIRWDYLEDTLISAGFPEVWLPEIARSTFGAR 93

Query: 63  MSVLVNGRPGNTFYPSR-----GIRQGDPLSPF 90
                 GR   +  P       G R  D  +PF
Sbjct: 94  RVAPEVGRADASKRPRVSDHRWGFRYDDMAAPF 126

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