BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1210.1
(421 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 60 2e-09
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 122 WKSLNQLNTDN---DNPWIVIGDLNCILDPLEKSG--GSNVSNSHMPKIIDIINNLGLLD 176
W + +L+ + ++PW+V+GD N I E SN+S + + + + L+D
Sbjct: 105 WDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDSDLVD 164
Query: 177 LGYQGKPYTWSNKQFGENLIQERLDRAMVNLQWLQHFQSSGV-----THLDVVGSDPILL 231
L +G YTWSN Q +N I +LDRA+VN WL F ++ + D IL
Sbjct: 165 LPCRGVLYTWSNHQ-QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMVILN 223
Query: 232 DNKDLSQISPKPFKFIRTWMTHPD 255
++ LS+ K FK+ THPD
Sbjct: 224 NSPPLSK--KKSFKYFSFLSTHPD 245