BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1220.1
(168 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G34585.1 | transmembrane protein | Chr2:14568227-14568472 REV... 57 5e-11
>AT2G34585.1 | transmembrane protein | Chr2:14568227-14568472
REVERSE LENGTH=81 | 201606
Length = 81
Score = 56.6 bits (135), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 25/26 (96%)
Query: 111 GWITIEIACKPCLEKGREAIDRSLDP 136
GWITIE+ACKPCLE GREAIDRSL+P
Sbjct: 17 GWITIELACKPCLESGREAIDRSLNP 42