BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000108.1_g1240.1
         (167 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G50590.1 | Transducin/WD40 repeat-like superfamily protein | ...   173   3e-50
AT3G50590.2 | Transducin/WD40 repeat-like superfamily protein | ...   172   6e-50

>AT3G50590.1 | Transducin/WD40 repeat-like superfamily protein |
            Chr3:18771292-18779220 FORWARD LENGTH=1614 | 201606
          Length = 1614

 Score =  173 bits (438), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 93/170 (54%), Positives = 115/170 (67%), Gaps = 26/170 (15%)

Query: 1    MKGIPQWELAGEVMPYMKTDDGTIPSIISDHIGVYLGIIKGRGDVIEVREDSLVKAFTVA 60
            MK IP+WELAGEVMPYMK +DGTIPSI++DHIGVYLG +KGR +V+E++EDSLV      
Sbjct: 1025 MKSIPKWELAGEVMPYMKNEDGTIPSIVADHIGVYLGCVKGRVNVVEIKEDSLV------ 1078

Query: 61   NADKTANGIQASAFTNLSNKSKGMGDNNLV-----GAALPGLETLAKQTGGSTGADEQAR 115
                       S    LS   K + D  L       +++ GLE+L KQ      ADEQA+
Sbjct: 1079 -----------SKPGGLSLLGKPVSDKPLALPAGESSSMMGLESLGKQ----NVADEQAK 1123

Query: 116  AEEEFKKSIYGNAGDGSSSDEEGVSKTKKIHIRIRDKPVAAAVDVNKIKE 165
            A EEFKK++YG  GDGSSSDEEGV+K KK+ IRIR+KP +  VDVNK+KE
Sbjct: 1124 AAEEFKKTMYGATGDGSSSDEEGVTKPKKLQIRIREKPTSTTVDVNKLKE 1173


>AT3G50590.2 | Transducin/WD40 repeat-like superfamily protein |
            Chr3:18771292-18779220 FORWARD LENGTH=1606 | 201606
          Length = 1606

 Score =  172 bits (435), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 93/170 (54%), Positives = 115/170 (67%), Gaps = 26/170 (15%)

Query: 1    MKGIPQWELAGEVMPYMKTDDGTIPSIISDHIGVYLGIIKGRGDVIEVREDSLVKAFTVA 60
            MK IP+WELAGEVMPYMK +DGTIPSI++DHIGVYLG +KGR +V+E++EDSLV      
Sbjct: 1017 MKSIPKWELAGEVMPYMKNEDGTIPSIVADHIGVYLGCVKGRVNVVEIKEDSLV------ 1070

Query: 61   NADKTANGIQASAFTNLSNKSKGMGDNNLV-----GAALPGLETLAKQTGGSTGADEQAR 115
                       S    LS   K + D  L       +++ GLE+L KQ      ADEQA+
Sbjct: 1071 -----------SKPGGLSLLGKPVSDKPLALPAGESSSMMGLESLGKQ----NVADEQAK 1115

Query: 116  AEEEFKKSIYGNAGDGSSSDEEGVSKTKKIHIRIRDKPVAAAVDVNKIKE 165
            A EEFKK++YG  GDGSSSDEEGV+K KK+ IRIR+KP +  VDVNK+KE
Sbjct: 1116 AAEEFKKTMYGATGDGSSSDEEGVTKPKKLQIRIREKPTSTTVDVNKLKE 1165


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