BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1260.1
(178 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G20810.1 | SAUR-like auxin-responsive protein family | Chr5:7... 168 9e-54
AT5G20810.2 | SAUR-like auxin-responsive protein family | Chr5:7... 169 1e-53
AT3G43120.1 | SAUR-like auxin-responsive protein family | Chr3:1... 161 5e-51
AT2G24400.1 | SAUR-like auxin-responsive protein family | Chr2:1... 90 9e-23
AT1G19830.1 | SAUR-like auxin-responsive protein family | Chr1:6... 83 1e-20
>AT5G20810.1 | SAUR-like auxin-responsive protein family |
Chr5:7044791-7045555 FORWARD LENGTH=165 | 201606
Length = 165
Score = 168 bits (426), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 87/145 (60%), Positives = 106/145 (73%), Gaps = 4/145 (2%)
Query: 3 EDEGASKISGIGQPVRLKEKLQKWQSLALTPRGNSPP--SDHKFPSGISPATDKRLKDDY 60
++ A+K++GI Q VRLKE LQKWQ++ + P+ PP + + + ISPA +KRL D
Sbjct: 2 DENNAAKLTGIRQIVRLKEILQKWQTVTIGPKSEVPPLAAGKQAVAMISPAINKRLLD-V 60
Query: 61 ILCDSDEDSCHSPSLPSDVPKGYLAVYVVGEELRRFIIPTDYLSHPVFEILLEKVEEEFG 120
DSDE++C SP P DVPKG LAVYV G ELRRFIIPT YLSH +F++LLEK EEEFG
Sbjct: 61 KNGDSDEETCQSPEPPHDVPKGNLAVYV-GPELRRFIIPTSYLSHSLFKVLLEKAEEEFG 119
Query: 121 FDHQSGLTIPCEIETFKYLLKCMET 145
FD LTIPCE+ETFKYLLKCME
Sbjct: 120 FDQSGALTIPCEVETFKYLLKCMEN 144
>AT5G20810.2 | SAUR-like auxin-responsive protein family |
Chr5:7044791-7045363 FORWARD LENGTH=190 | 201606
Length = 190
Score = 169 bits (428), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 116/177 (65%), Gaps = 9/177 (5%)
Query: 3 EDEGASKISGIGQPVRLKEKLQKWQSLALTPRGNSPP--SDHKFPSGISPATDKRLKDDY 60
++ A+K++GI Q VRLKE LQKWQ++ + P+ PP + + + ISPA +KRL D
Sbjct: 2 DENNAAKLTGIRQIVRLKEILQKWQTVTIGPKSEVPPLAAGKQAVAMISPAINKRLLD-V 60
Query: 61 ILCDSDEDSCHSPSLPSDVPKGYLAVYVVGEELRRFIIPTDYLSHPVFEILLEKVEEEFG 120
DSDE++C SP P DVPKG LAVYV G ELRRFIIPT YLSH +F++LLEK EEEFG
Sbjct: 61 KNGDSDEETCQSPEPPHDVPKGNLAVYV-GPELRRFIIPTSYLSHSLFKVLLEKAEEEFG 119
Query: 121 FDHQSGLTIPCEIETFKYLLKCMETCV-----DQNPHQGPRHQKRPLRRQAQRNTLG 172
FD LTIPCE+ETFKYLLKCME + D N + P+ Q P N G
Sbjct: 120 FDQSGALTIPCEVETFKYLLKCMENNLKDLHPDDNSGKPPKDQLLPRDHTMNSNPGG 176
>AT3G43120.1 | SAUR-like auxin-responsive protein family |
Chr3:15094644-15095312 FORWARD LENGTH=160 | 201606
Length = 160
Score = 161 bits (408), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 106/144 (73%), Gaps = 4/144 (2%)
Query: 3 EDEGASKISGIGQPVRLKEKLQKWQSLALTPRGNSPP-SDHKFPSGISPATDKRLKDDYI 61
++ A+K++GI Q VRLKE LQKWQ++ + + + K + ISP +KRL D
Sbjct: 2 DENNAAKLTGIKQIVRLKEILQKWQTVTIGSKSDDGELGARKHTAIISPVINKRLLD-LK 60
Query: 62 LCDSDEDS-CHSPSLPSDVPKGYLAVYVVGEELRRFIIPTDYLSHPVFEILLEKVEEEFG 120
CDSDE++ C SP P DVPKGYLAVYV G ELRRFIIPT++LSH +F++LLEK EEE+G
Sbjct: 61 TCDSDEETTCQSPEPPPDVPKGYLAVYV-GPELRRFIIPTNFLSHSLFKVLLEKAEEEYG 119
Query: 121 FDHQSGLTIPCEIETFKYLLKCME 144
FDH LTIPCE+ETFKYLLKC+E
Sbjct: 120 FDHSGALTIPCEVETFKYLLKCIE 143
>AT2G24400.1 | SAUR-like auxin-responsive protein family |
Chr2:10377993-10378529 REVERSE LENGTH=178 | 201606
Length = 178
Score = 90.1 bits (222), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Query: 7 ASKISGIGQPVRLKEKLQKWQSLALTPRGNSPPSDHKFPSGISPATDKRLKDDYILCDSD 66
A K + I + V+L++ L+KW+ A+ + + ++ SG + K LK D
Sbjct: 3 AKKSNKIREIVKLQQLLKKWRKQAIASKAANNNNEDNNSSGGGSKSIKFLKRTLSFTDV- 61
Query: 67 EDSCHSPSLPSDVPKGYLAVYVVGEELRRFIIPTDYLSHPVFEILLEKVEEEFGFDHQSG 126
+ VPKGYLAV VG E +R+ IPT+YLSH F +LL + EEEFGF
Sbjct: 62 ----------TAVPKGYLAV-SVGLEKKRYTIPTEYLSHQAFYVLLREAEEEFGFQQAGV 110
Query: 127 LTIPCEIETFKYLLKCME 144
L IPCE+ F+ +LK ME
Sbjct: 111 LRIPCEVSVFESILKIME 128
>AT1G19830.1 | SAUR-like auxin-responsive protein family |
Chr1:6852230-6852583 FORWARD LENGTH=117 | 201606
Length = 117
Score = 82.8 bits (203), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 74 SLPSDVPKGYLAVYVVGEELRRFIIPTDYLSHPVFEILLEKVEEEFGFDHQSGLTIPCEI 133
SLP DVPKG+ VYV G +R +++P +L+ P F++LL++ EEEFGFDH GLTIPCE
Sbjct: 43 SLPLDVPKGHFVVYVGGNRVR-YVLPISFLTRPEFQLLLQQAEEEFGFDHNMGLTIPCEE 101
Query: 134 ETFKYLLKCM 143
FK L+ M
Sbjct: 102 VAFKSLITSM 111