BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1320.1
(729 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 185 1e-48
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 185 1e-48
AT3G19510.2 | Homeodomain-like protein with RING/FYVE/PHD-type z... 170 3e-44
AT3G19510.1 | Homeodomain-like protein with RING/FYVE/PHD-type z... 170 3e-44
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 132 2e-34
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 185 bits (470), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 197/356 (55%), Gaps = 8/356 (2%)
Query: 16 VCKFVRSLYGLKQAPKQWHEKFDKAMLSNGFSINECDKCVYTKSTTNGVIILCLYVDDML 75
VC +S+YGLKQA +QW KF ++ GF + D + K T + + +YVDD++
Sbjct: 229 VCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDII 288
Query: 76 IMGSNLDMIKSTKEMLSKVFDVKDLGQADLILGIKICRTSNGIVLSQSHYIEKILEKFNK 135
I +N + K L F ++DLG LG++I R++ GI + Q Y +L++
Sbjct: 289 ICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGL 348
Query: 136 NDNQVVKTPVDLSLHLTKNTGHS-TNQLEYSRIIGSLMYLMNCTRPDIAYSVSKLSRFTS 194
+ P+D S+ + ++G + Y R+IG LMYL TR DI+++V+KLS+F+
Sbjct: 349 LGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYL-QITRLDISFAVNKLSQFSE 407
Query: 195 NPNTSHWSALIRVLRYLRYTKEYGLHFTKYPAV-LEGYTDANWISDTNDSKSTSGYVFTI 253
P +H A++++L Y++ T GL ++ + L+ ++DA++ S + +ST+GY +
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 254 GGASVSWKSSKQTCIARSTMESEFIALDKAGEEAEWLRNFLEDIPIWPKPVS-AIKIHCD 312
G + +SWKS KQ +++S+ E+E+ AL A +E WL F ++ + P+S + CD
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL---PLSKPTLLFCD 524
Query: 313 SKSAIGKAHNKMYNGKSRHIRRRHNTVKHLLSSGIITIDYIKSKDNLADPFTKGLS 368
+ +AI A N +++ +++HI ++V+ S T+ Y + D FT+ LS
Sbjct: 525 NTAAIHIATNAVFHERTKHIESDCHSVRE-RSVYQATLSYSFQAYDEQDGFTEYLS 579
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 185 bits (470), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 197/356 (55%), Gaps = 8/356 (2%)
Query: 16 VCKFVRSLYGLKQAPKQWHEKFDKAMLSNGFSINECDKCVYTKSTTNGVIILCLYVDDML 75
VC +S+YGLKQA +QW KF ++ GF + D + K T + + +YVDD++
Sbjct: 229 VCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDII 288
Query: 76 IMGSNLDMIKSTKEMLSKVFDVKDLGQADLILGIKICRTSNGIVLSQSHYIEKILEKFNK 135
I +N + K L F ++DLG LG++I R++ GI + Q Y +L++
Sbjct: 289 ICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGL 348
Query: 136 NDNQVVKTPVDLSLHLTKNTGHS-TNQLEYSRIIGSLMYLMNCTRPDIAYSVSKLSRFTS 194
+ P+D S+ + ++G + Y R+IG LMYL TR DI+++V+KLS+F+
Sbjct: 349 LGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYL-QITRLDISFAVNKLSQFSE 407
Query: 195 NPNTSHWSALIRVLRYLRYTKEYGLHFTKYPAV-LEGYTDANWISDTNDSKSTSGYVFTI 253
P +H A++++L Y++ T GL ++ + L+ ++DA++ S + +ST+GY +
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 254 GGASVSWKSSKQTCIARSTMESEFIALDKAGEEAEWLRNFLEDIPIWPKPVS-AIKIHCD 312
G + +SWKS KQ +++S+ E+E+ AL A +E WL F ++ + P+S + CD
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL---PLSKPTLLFCD 524
Query: 313 SKSAIGKAHNKMYNGKSRHIRRRHNTVKHLLSSGIITIDYIKSKDNLADPFTKGLS 368
+ +AI A N +++ +++HI ++V+ S T+ Y + D FT+ LS
Sbjct: 525 NTAAIHIATNAVFHERTKHIESDCHSVRE-RSVYQATLSYSFQAYDEQDGFTEYLS 579
>AT3G19510.2 | Homeodomain-like protein with RING/FYVE/PHD-type zinc
finger domain-containing protein | Chr3:6763205-6766049
REVERSE LENGTH=723 | 201606
Length = 723
Score = 170 bits (431), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/163 (55%), Positives = 113/163 (69%), Gaps = 12/163 (7%)
Query: 391 ESVFDSNGEIDSEDV--GEILSEDLSLENDIILCDGICNHGFHQMCLNPPLLKEEIPQGD 448
ES+FD++GEI SED+ + S+DLS++NDIILCDG C+ GFHQ CL PPL KE+IP D
Sbjct: 252 ESLFDTDGEISSEDIFCAKCGSKDLSVDNDIILCDGFCDRGFHQYCLEPPLRKEDIPPDD 311
Query: 449 EGWLCPGCDCKVDCIDLLNHHLGTDLSIEDNWEKVFPEAAATAAGNKLDDNFDYPSDDSE 508
EGWLCPGCDCK D +DLLN LGT S+ D+WEK+FPEAAA G + + D PSDDS+
Sbjct: 312 EGWLCPGCDCKDDSLDLLNDSLGTKFSVSDSWEKIFPEAAAALVGGGQNLDCDLPSDDSD 371
Query: 509 ----------DIDYDPNGPVVDERVEAEASSSDESDFTSASDD 541
D + D +G +E E E SSDE++FTSASD+
Sbjct: 372 DEEYDPDCLNDNENDEDGSDDNEESENEDGSSDETEFTSASDE 414
>AT3G19510.1 | Homeodomain-like protein with RING/FYVE/PHD-type zinc
finger domain-containing protein | Chr3:6763205-6766049
REVERSE LENGTH=723 | 201606
Length = 723
Score = 170 bits (431), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/163 (55%), Positives = 113/163 (69%), Gaps = 12/163 (7%)
Query: 391 ESVFDSNGEIDSEDV--GEILSEDLSLENDIILCDGICNHGFHQMCLNPPLLKEEIPQGD 448
ES+FD++GEI SED+ + S+DLS++NDIILCDG C+ GFHQ CL PPL KE+IP D
Sbjct: 252 ESLFDTDGEISSEDIFCAKCGSKDLSVDNDIILCDGFCDRGFHQYCLEPPLRKEDIPPDD 311
Query: 449 EGWLCPGCDCKVDCIDLLNHHLGTDLSIEDNWEKVFPEAAATAAGNKLDDNFDYPSDDSE 508
EGWLCPGCDCK D +DLLN LGT S+ D+WEK+FPEAAA G + + D PSDDS+
Sbjct: 312 EGWLCPGCDCKDDSLDLLNDSLGTKFSVSDSWEKIFPEAAAALVGGGQNLDCDLPSDDSD 371
Query: 509 ----------DIDYDPNGPVVDERVEAEASSSDESDFTSASDD 541
D + D +G +E E E SSDE++FTSASD+
Sbjct: 372 DEEYDPDCLNDNENDEDGSDDNEESENEDGSSDETEFTSASDE 414
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 132 bits (331), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 128/226 (56%), Gaps = 2/226 (0%)
Query: 65 IILCLYVDDMLIMGSNLDMIKSTKEMLSKVFDVKDLGQADLILGIKICRTSNGIVLSQSH 124
+ L LYVDD+L+ GS+ ++ LS F +KDLG LGI+I +G+ LSQ+
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 125 YIEKILEKFNKNDNQVVKTPVDLSLHLTKNTGHSTNQLEYSRIIGSLMYLMNCTRPDIAY 184
Y E+IL D + + TP+ L L+ + +T + ++ I+G+L YL TRPDI+Y
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYL-TLTRPDISY 119
Query: 185 SVSKLSRFTSNPNTSHWSALIRVLRYLRYTKEYGLHFTKYPAV-LEGYTDANWISDTNDS 243
+V+ + + P + + L RVLRY++ T +GL+ K + ++ + D++W T+
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 244 KSTSGYVFTIGGASVSWKSSKQTCIARSTMESEFIALDKAGEEAEW 289
+ST+G+ +G +SW + +Q ++RS+ E+E+ AL E W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225