BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1360.1
(559 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 223 1e-62
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 223 1e-62
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 92 3e-21
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 68 1e-13
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 62 2e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 223 bits (567), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 172/281 (61%), Gaps = 9/281 (3%)
Query: 279 YEVVDNEEELNLCCFLMDCDPISYEEAIQEEKWENTMNEEINAIEKNDTWELTSLPKGYK 338
YE V L C +P +Y EA + W M++EI A+E TWE+ +LP K
Sbjct: 66 YEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKK 125
Query: 339 PIGVKWVYKTKKNASGEVQRYKARLVAKGYKQRAGIDYSEVFAPVARMETIRLLISIAAQ 398
PIG KWVYK K N+ G ++RYKARLVAKGY Q+ GID+ E F+PV ++ +++L+++I+A
Sbjct: 126 PIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAI 185
Query: 399 YSWKIYQLDVKSAFLNGILEEEIYVEQPLGY-VRKGKE---DKVYKLKKALYGLKQAPRA 454
Y++ ++QLD+ +AFLNG L+EEIY++ P GY R+G + V LKK++YGLKQA R
Sbjct: 186 YNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQ 245
Query: 455 WNARIDKYFQENGFEKCPHEHTLYMKMKEDGGMLFVC--LYVDDLIFTGNDSRLFEEFKK 512
W + GF + +HT ++K+ LF+C +YVDD+I N+ +E K
Sbjct: 246 WFLKFSVTLIGFGFVQSHSDHTYFLKIT---ATLFLCVLVYVDDIIICSNNDAAVDELKS 302
Query: 513 SMVKEFDMTDIGLMGHFLGIEVKQMENGIFISQSGYAKEVL 553
+ F + D+G + +FLG+E+ + GI I Q YA ++L
Sbjct: 303 QLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLL 343
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 223 bits (567), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 172/281 (61%), Gaps = 9/281 (3%)
Query: 279 YEVVDNEEELNLCCFLMDCDPISYEEAIQEEKWENTMNEEINAIEKNDTWELTSLPKGYK 338
YE V L C +P +Y EA + W M++EI A+E TWE+ +LP K
Sbjct: 66 YEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKK 125
Query: 339 PIGVKWVYKTKKNASGEVQRYKARLVAKGYKQRAGIDYSEVFAPVARMETIRLLISIAAQ 398
PIG KWVYK K N+ G ++RYKARLVAKGY Q+ GID+ E F+PV ++ +++L+++I+A
Sbjct: 126 PIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAI 185
Query: 399 YSWKIYQLDVKSAFLNGILEEEIYVEQPLGY-VRKGKE---DKVYKLKKALYGLKQAPRA 454
Y++ ++QLD+ +AFLNG L+EEIY++ P GY R+G + V LKK++YGLKQA R
Sbjct: 186 YNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQ 245
Query: 455 WNARIDKYFQENGFEKCPHEHTLYMKMKEDGGMLFVC--LYVDDLIFTGNDSRLFEEFKK 512
W + GF + +HT ++K+ LF+C +YVDD+I N+ +E K
Sbjct: 246 WFLKFSVTLIGFGFVQSHSDHTYFLKIT---ATLFLCVLVYVDDIIICSNNDAAVDELKS 302
Query: 513 SMVKEFDMTDIGLMGHFLGIEVKQMENGIFISQSGYAKEVL 553
+ F + D+G + +FLG+E+ + GI I Q YA ++L
Sbjct: 303 QLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLL 343
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 91.7 bits (226), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%)
Query: 298 DPISYEEAIQEEKWENTMNEEINAIEKNDTWELTSLPKGYKPIGVKWVYKTKKNASGEVQ 357
+P S A+++ W M EE++A+ +N TW L P +G KWV+KTK ++ G +
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 358 RYKARLVAKGYKQRAGIDYSEVFAPVARMETIRLLISIAAQ 398
R KARLVAKG+ Q GI + E ++PV R TIR ++++A Q
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ 127
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 67.8 bits (164), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 48/85 (56%)
Query: 95 NRTILNMARSMLKEKSLPREFWGEAVACAVYLLNRCPTKSVYMKTPQEAWGYYKPSVSHL 154
NRTI+ RSML E LP+ F +A AV+++N+ P+ ++ P E W P+ S+L
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 155 KIFGCIAHAKIPEAKRTKLDDKGEK 179
+ FGC+A+ E K KGE+
Sbjct: 62 RRFGCVAYIHCDEGKLKPRAKKGEE 86
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%)
Query: 488 LFVCLYVDDLIFTGNDSRLFEEFKKSMVKEFDMTDIGLMGHFLGIEVKQMENGIFISQSG 547
+++ LYVDD++ TG+ + L + F M D+G + +FLGI++K +G+F+SQ+
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 548 YAKEVLKRFKM 558
YA+++L M
Sbjct: 61 YAEQILNNAGM 71