BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1370.1
(133 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G10470.2 | kinesin like protein for actin based chloroplast m... 73 7e-16
AT5G10470.1 | kinesin like protein for actin based chloroplast m... 73 7e-16
AT5G65460.5 | kinesin like protein for actin based chloroplast m... 72 2e-15
AT5G65460.4 | kinesin like protein for actin based chloroplast m... 72 3e-15
AT5G65460.3 | kinesin like protein for actin based chloroplast m... 72 3e-15
>AT5G10470.2 | kinesin like protein for actin based chloroplast
movement 1 | Chr5:3290121-3297248 REVERSE LENGTH=1274 |
201606
Length = 1274
Score = 73.2 bits (178), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 1 LYEKENDIQILKQEPLGIKQELKDAKDQCTLLFNEVQKAWKVSFTLQEDL 50
L EKE + Q LKQE +G+K+ LKDA DQC LL++EVQ+AWKVSFTLQ DL
Sbjct: 480 LLEKERENQNLKQEVVGLKKALKDANDQCVLLYSEVQRAWKVSFTLQSDL 529
>AT5G10470.1 | kinesin like protein for actin based chloroplast
movement 1 | Chr5:3290121-3297248 REVERSE LENGTH=1273 |
201606
Length = 1273
Score = 73.2 bits (178), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 1 LYEKENDIQILKQEPLGIKQELKDAKDQCTLLFNEVQKAWKVSFTLQEDL 50
L EKE + Q LKQE +G+K+ LKDA DQC LL++EVQ+AWKVSFTLQ DL
Sbjct: 480 LLEKERENQNLKQEVVGLKKALKDANDQCVLLYSEVQRAWKVSFTLQSDL 529
>AT5G65460.5 | kinesin like protein for actin based chloroplast
movement 2 | Chr5:26161831-26167244 REVERSE LENGTH=1021
| 201606
Length = 1021
Score = 71.6 bits (174), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%)
Query: 1 LYEKENDIQILKQEPLGIKQELKDAKDQCTLLFNEVQKAWKVSFTLQEDL 50
+ EKE + Q LKQE G+KQ LK+A DQC LL+NEVQ+AW+VSFTLQ DL
Sbjct: 230 VLEKERENQRLKQEVTGLKQALKEANDQCVLLYNEVQRAWRVSFTLQSDL 279
>AT5G65460.4 | kinesin like protein for actin based chloroplast
movement 2 | Chr5:26161831-26169001 REVERSE LENGTH=1267
| 201606
Length = 1267
Score = 71.6 bits (174), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%)
Query: 1 LYEKENDIQILKQEPLGIKQELKDAKDQCTLLFNEVQKAWKVSFTLQEDL 50
+ EKE + Q LKQE G+KQ LK+A DQC LL+NEVQ+AW+VSFTLQ DL
Sbjct: 476 VLEKERENQRLKQEVTGLKQALKEANDQCVLLYNEVQRAWRVSFTLQSDL 525
>AT5G65460.3 | kinesin like protein for actin based chloroplast
movement 2 | Chr5:26161831-26169001 REVERSE LENGTH=1274
| 201606
Length = 1274
Score = 71.6 bits (174), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 40/50 (80%)
Query: 1 LYEKENDIQILKQEPLGIKQELKDAKDQCTLLFNEVQKAWKVSFTLQEDL 50
+ EKE + Q LKQE G+KQ LK+A DQC LL+NEVQ+AW+VSFTLQ DL
Sbjct: 483 VLEKERENQRLKQEVTGLKQALKEANDQCVLLYNEVQRAWRVSFTLQSDL 532