BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1390.1
(318 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G10470.1 | kinesin like protein for actin based chloroplast m... 127 2e-32
AT5G10470.2 | kinesin like protein for actin based chloroplast m... 127 2e-32
AT5G65460.2 | kinesin like protein for actin based chloroplast m... 125 9e-32
AT5G65460.1 | kinesin like protein for actin based chloroplast m... 125 1e-31
AT5G65460.6 | kinesin like protein for actin based chloroplast m... 125 1e-31
>AT5G10470.1 | kinesin like protein for actin based chloroplast
movement 1 | Chr5:3290121-3297248 REVERSE LENGTH=1273 |
201606
Length = 1273
Score = 127 bits (320), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 63/89 (70%)
Query: 3 GNIKVYCRIRPLFEDEGPSVVEFPDDFTIRVETGDSSLSNPKKDIEFDRVYGPHVGQGEL 62
GNIKV+CR RPLFEDEGPSV+EFP D TI V T D +LSNPKKD EFDRVYGPHVGQ L
Sbjct: 141 GNIKVFCRARPLFEDEGPSVIEFPGDCTICVNTSDDTLSNPKKDFEFDRVYGPHVGQAAL 200
Query: 63 FHDVQPFVQQHWMDIMFPYLLMGKLILGK 91
F DVQPFVQ L G+ GK
Sbjct: 201 FSDVQPFVQSALDGSNVSILSYGQTNAGK 229
>AT5G10470.2 | kinesin like protein for actin based chloroplast
movement 1 | Chr5:3290121-3297248 REVERSE LENGTH=1274 |
201606
Length = 1274
Score = 127 bits (320), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 63/89 (70%)
Query: 3 GNIKVYCRIRPLFEDEGPSVVEFPDDFTIRVETGDSSLSNPKKDIEFDRVYGPHVGQGEL 62
GNIKV+CR RPLFEDEGPSV+EFP D TI V T D +LSNPKKD EFDRVYGPHVGQ L
Sbjct: 141 GNIKVFCRARPLFEDEGPSVIEFPGDCTICVNTSDDTLSNPKKDFEFDRVYGPHVGQAAL 200
Query: 63 FHDVQPFVQQHWMDIMFPYLLMGKLILGK 91
F DVQPFVQ L G+ GK
Sbjct: 201 FSDVQPFVQSALDGSNVSILSYGQTNAGK 229
>AT5G65460.2 | kinesin like protein for actin based chloroplast
movement 2 | Chr5:26162366-26169001 REVERSE LENGTH=1121
| 201606
Length = 1121
Score = 125 bits (315), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 78/156 (50%), Gaps = 43/156 (27%)
Query: 3 GNIKVYCRIRPLFEDEGPSVVEFPDDFTIRVETGDSSLSNPKKDIEFDRVYGPHVGQGEL 62
GN+KV+CR RPLFEDEGPS++EFPD+ TIRV T D +LSNPKK+ EFDRVYGP VGQ L
Sbjct: 137 GNVKVFCRARPLFEDEGPSIIEFPDNCTIRVNTSDDTLSNPKKEFEFDRVYGPQVGQASL 196
Query: 63 FHDVQPFVQQHWMDIMFPYLLMGKLILGK----------HTLWV---------------- 96
F DVQPFVQ G+ GK L+
Sbjct: 197 FSDVQPFVQSALDGSNVSIFAYGQTHAGKTYTMEGSNQDRGLYARCFEELMDLANSDSTS 256
Query: 97 -----------------VRDLLPESFSNIPKVGMGF 115
VRDLL SN+PK+ MG
Sbjct: 257 ASQFSFSVSVFELYNEQVRDLLSGCQSNLPKINMGL 292
>AT5G65460.1 | kinesin like protein for actin based chloroplast
movement 2 | Chr5:26161831-26169001 REVERSE LENGTH=1264
| 201606
Length = 1264
Score = 125 bits (314), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 78/156 (50%), Gaps = 43/156 (27%)
Query: 3 GNIKVYCRIRPLFEDEGPSVVEFPDDFTIRVETGDSSLSNPKKDIEFDRVYGPHVGQGEL 62
GN+KV+CR RPLFEDEGPS++EFPD+ TIRV T D +LSNPKK+ EFDRVYGP VGQ L
Sbjct: 137 GNVKVFCRARPLFEDEGPSIIEFPDNCTIRVNTSDDTLSNPKKEFEFDRVYGPQVGQASL 196
Query: 63 FHDVQPFVQQHWMDIMFPYLLMGKLILGK----------HTLWV---------------- 96
F DVQPFVQ G+ GK L+
Sbjct: 197 FSDVQPFVQSALDGSNVSIFAYGQTHAGKTYTMEGSNQDRGLYARCFEELMDLANSDSTS 256
Query: 97 -----------------VRDLLPESFSNIPKVGMGF 115
VRDLL SN+PK+ MG
Sbjct: 257 ASQFSFSVSVFELYNEQVRDLLSGCQSNLPKINMGL 292
>AT5G65460.6 | kinesin like protein for actin based chloroplast
movement 2 | Chr5:26162614-26169001 REVERSE LENGTH=1071
| 201606
Length = 1071
Score = 125 bits (314), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 59/69 (85%)
Query: 3 GNIKVYCRIRPLFEDEGPSVVEFPDDFTIRVETGDSSLSNPKKDIEFDRVYGPHVGQGEL 62
GN+KV+CR RPLFEDEGPS++EFPD+ TIRV T D +LSNPKK+ EFDRVYGP VGQ L
Sbjct: 137 GNVKVFCRARPLFEDEGPSIIEFPDNCTIRVNTSDDTLSNPKKEFEFDRVYGPQVGQASL 196
Query: 63 FHDVQPFVQ 71
F DVQPFVQ
Sbjct: 197 FSDVQPFVQ 205