BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1440.1
(199 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G43270.1 | Plant invertase/pectin methylesterase inhibitor su... 84 1e-18
AT4G33220.1 | pectin methylesterase 44 | Chr4:16022506-16026130 ... 80 1e-17
AT3G05620.1 | Plant invertase/pectin methylesterase inhibitor su... 59 4e-10
AT4G25250.1 | Plant invertase/pectin methylesterase inhibitor su... 49 4e-07
AT1G62770.1 | Plant invertase/pectin methylesterase inhibitor su... 46 6e-06
>AT3G43270.1 | Plant invertase/pectin methylesterase inhibitor
superfamily | Chr3:15222402-15225124 REVERSE LENGTH=527
| 201606
Length = 527
Score = 83.6 bits (205), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 19/144 (13%)
Query: 35 ECLNTPTLICFSSVELTIEQVKNVTIFVSNFKNVFAHSFRLSNAINDCLDLLGLSAEELR 94
ECL P L + + ++ + VS F S R+SNAI DC+DLL +AEEL
Sbjct: 38 ECLRVPPLEFAEAAKTVVDAITKAVAIVSKFDKKAGKS-RVSNAIVDCVDLLDSAAEELS 96
Query: 95 WTLTSLSSASASHHKNHKTAEERPTRKQGKAGRLLSDDLRSWLTAALDNQDTCIQGFENT 154
W ++ A + P K G + SD LR+W++AAL NQDTC+ GFE T
Sbjct: 97 WIIS---------------ASQSPNGKDNSTGDVGSD-LRTWISAALSNQDTCLDGFEGT 140
Query: 155 TGFVYERQLMSEALKHVTSLVCHL 178
G + +++++ L V + V +L
Sbjct: 141 NGII--KKIVAGGLSKVGTTVRNL 162
>AT4G33220.1 | pectin methylesterase 44 | Chr4:16022506-16026130
FORWARD LENGTH=525 | 201606
Length = 525
Score = 80.5 bits (197), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 19/160 (11%)
Query: 35 ECLNTPTLICFSSVELTIEQVKNVTIFVSNFKNVFAHSFRLSNAINDCLDLLGLSAEELR 94
+ L P SS+ + ++ V+ +S F + F+ RL NA++DCLDLL S+EEL
Sbjct: 26 DYLKVPASEFVSSINTIVVVIRQVSSILSQFAD-FSGDRRLQNAVSDCLDLLDFSSEELT 84
Query: 95 WTLTSLSSASASHHKNHKTAEERPTRKQGKAGRLLSDDLRSWLTAALDNQDTCIQGFENT 154
W SASAS E P K G + SD R+WL+AAL NQ TC++GF+ T
Sbjct: 85 W------SASAS---------ENPKGKGNGTGDVGSD-TRTWLSAALSNQATCMEGFDGT 128
Query: 155 TGFVYERQLMSEALKHVTSLVCHLAMVRRDNQTNQYHQSP 194
+G V + L++ +L + S++ L + + Q + P
Sbjct: 129 SGLV--KSLVAGSLDQLYSMLRELLPLVQPEQKPKAVSKP 166
>AT3G05620.1 | Plant invertase/pectin methylesterase inhibitor
superfamily | Chr3:1629658-1631766 REVERSE LENGTH=543 |
201606
Length = 543
Score = 58.9 bits (141), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 78 AINDCLDLLGLSAEELRWTLTSLSSASASHHKNHKTAEERPTRKQGKAGRLLSDDLRSWL 137
AI DC +L+G S EL W++ ++ H + + AG +L++WL
Sbjct: 104 AIEDCKELVGFSVTELAWSMLEMNKL----HGGGGIDLDDGSHDAAAAG----GNLKTWL 155
Query: 138 TAALDNQDTCIQGFENTTGFVYERQLMSEALKHVTSLVCHL 178
+AA+ NQDTC++GFE T YE +L+ +L+ VT LV ++
Sbjct: 156 SAAMSNQDTCLEGFEGTER-KYE-ELIKGSLRQVTQLVSNV 194
>AT4G25250.1 | Plant invertase/pectin methylesterase inhibitor
superfamily protein | Chr4:12934632-12935231 FORWARD
LENGTH=199 | 201606
Length = 199
Score = 48.9 bits (115), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 19/115 (16%)
Query: 40 PTLICFSSVELTIEQVKNVTIFVSNF--KNVFAHSFRLSNAINDCLDLLGLSAEELRWTL 97
P +C +S+ L ++ KN T+ VSN K A S +S + DC+D + + +EL+ +
Sbjct: 66 PIKLCTTSLNLNVKSAKNATLVVSNLLQKAKAAKSHEVS-ILKDCVDEMKDTIDELKQAV 124
Query: 98 TSLSSASASHHKNHKTAEERPTRKQGKAGRLLSDDLRSWLTAALDNQDTCIQGFE 152
AE + R GK ++++W+++AL ++ TC GFE
Sbjct: 125 ----------------AEMKYVRGGGKTTEEHLKNVKTWVSSALTDEGTCTDGFE 163
>AT1G62770.1 | Plant invertase/pectin methylesterase inhibitor
superfamily protein | Chr1:23246085-23246836 REVERSE
LENGTH=204 | 201606
Length = 204
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 22/133 (16%)
Query: 50 LTIEQVKNVTIFVSNF-KNVFAHSFRLSNAINDCLDLLGLSAEELRWTLTSLSSASASHH 108
+++ + K+VTIFV+ K R AI DC+++LG S + L ++ L+ A
Sbjct: 73 ISLARAKSVTIFVAKLTKETPKFKRREYLAIKDCIEVLGNSVDRLAQSVKELARA----- 127
Query: 109 KNHKTAEERPTRKQGKAGRLLSDDLRSWLTAALDNQDTCIQGFENTTGFVYERQLMSEAL 168
H A E K ++++W++AAL ++ TC+ GF ER + +
Sbjct: 128 -GHAVASEDFMWKMS--------NVQTWVSAALTDETTCLDGFS-------ERAMGGKVK 171
Query: 169 KHVTSLVCHLAMV 181
+ + V H+A V
Sbjct: 172 RLIRYKVVHVAQV 184