BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1510.1
(205 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 115 8e-32
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 99 9e-24
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 99 9e-24
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 59 2e-11
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 115 bits (289), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 110/202 (54%), Gaps = 11/202 (5%)
Query: 3 FEMKDMGAAKKLLGMEIKRERSSKKLYLNQKGYIERVVFRFEMQNAKAVTTPLAPHFRLS 62
F MKD+G LG++IK S L+L+Q Y E+++ M + K ++TPL L
Sbjct: 31 FSMKDLGPVHYFLGIQIKTHPSG--LFLSQTKYAEQILNNAGMLDCKPMSTPLP----LK 84
Query: 63 GRQSPTTTVEKDHMDRVPYASAVGSLMYAMVCTRPDFSQAVSVVSRFMANPGKTHWEAVK 122
S +T D D + S VG+L Y + TRPD S AV++V + M P ++ +K
Sbjct: 85 LNSSVSTAKYPDPSD---FRSIVGALQY-LTLTRPDISYAVNIVCQRMHEPTLADFDLLK 140
Query: 123 WVLRYLKGTVDTGLYFNGDT-CQVSGYVDSDYAGDLDRRRSVTGYVFRVHGAPVSWRSML 181
VLRY+KGT+ GLY + ++ V + DSD+AG RRS TG+ + +SW +
Sbjct: 141 RVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKR 200
Query: 182 QSTVALSTTEAEYMAMAEGVKE 203
Q TV+ S+TE EY A+A E
Sbjct: 201 QPTVSRSSTETEYRALALTAAE 222
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 98.6 bits (244), Expect = 9e-24, Method: Composition-based stats.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 3 FEMKDMGAAKKLLGMEIKRERSSKKLYLNQKGYIERVVFRFEMQNAKAVTTPLAPHFRLS 62
F+++D+G K LG+EI R S+ + + Q+ Y ++ + K + P+ P S
Sbjct: 308 FKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFS 365
Query: 63 GRQSPTTTVEKDHMDRVPYASAVGSLMYAMVCTRPDFSQAVSVVSRFMANPGKTHWEAVK 122
D +D Y +G LMY + TR D S AV+ +S+F P H +AV
Sbjct: 366 AHSG------GDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVM 418
Query: 123 WVLRYLKGTVDTGLYFNGDT-CQVSGYVDSDYAGDLDRRRSVTGYVFRVHGAPVSWRSML 181
+L Y+KGTV GL+++ Q+ + D+ + D RRS GY + + +SW+S
Sbjct: 419 KILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKK 478
Query: 182 QSTVALSTTEAEYMAMAEGVKEAL 205
Q V+ S+ EAEY A++ E +
Sbjct: 479 QQVVSKSSAEAEYRALSFATDEMM 502
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 98.6 bits (244), Expect = 9e-24, Method: Composition-based stats.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 3 FEMKDMGAAKKLLGMEIKRERSSKKLYLNQKGYIERVVFRFEMQNAKAVTTPLAPHFRLS 62
F+++D+G K LG+EI R S+ + + Q+ Y ++ + K + P+ P S
Sbjct: 308 FKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFS 365
Query: 63 GRQSPTTTVEKDHMDRVPYASAVGSLMYAMVCTRPDFSQAVSVVSRFMANPGKTHWEAVK 122
D +D Y +G LMY + TR D S AV+ +S+F P H +AV
Sbjct: 366 AHSG------GDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVM 418
Query: 123 WVLRYLKGTVDTGLYFNGDT-CQVSGYVDSDYAGDLDRRRSVTGYVFRVHGAPVSWRSML 181
+L Y+KGTV GL+++ Q+ + D+ + D RRS GY + + +SW+S
Sbjct: 419 KILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKK 478
Query: 182 QSTVALSTTEAEYMAMAEGVKEAL 205
Q V+ S+ EAEY A++ E +
Sbjct: 479 QQVVSKSSAEAEYRALSFATDEMM 502
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 58.9 bits (141), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 89 MYAMVCTRPDFSQAVSVVSRFMANPGKTHWEAVKWVLRYLKGTVDTGLYFNGDT-CQVSG 147
MY + TRPD + AV+ +S+F + +AV VL Y+KGTV GL+++ + Q+
Sbjct: 1 MY-LTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 148 YVDSDYAGDLDRRRSVTGYV 167
+ DSD+A D RRSVTG+
Sbjct: 60 FADSDWASCPDTRRSVTGFC 79