BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1520.1
(201 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54200.1 | Late embryogenesis abundant (LEA) hydroxyproline-r... 126 5e-36
AT2G46150.1 | Late embryogenesis abundant (LEA) hydroxyproline-r... 106 2e-28
AT3G05975.1 | Late embryogenesis abundant (LEA) hydroxyproline-r... 104 4e-28
AT4G23930.1 | Late embryogenesis abundant (LEA) hydroxyproline-r... 71 2e-15
AT1G64065.1 | Late embryogenesis abundant (LEA) hydroxyproline-r... 51 1e-07
>AT3G54200.1 | Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family | Chr3:20065731-20066438 FORWARD
LENGTH=235 | 201606
Length = 235
Score = 126 bits (317), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 114/162 (70%)
Query: 40 FTIFKPKHTITKVNSIKLDGLKVSLDVPRLGVDLNITLILNLSVKNPNKAGFKYGNGSTL 99
FT+FKPK T ++S+ +D L+ S++ L V LN+TL ++LS+KNPN+ GF Y + S L
Sbjct: 74 FTLFKPKRPTTTIDSVTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSAL 133
Query: 100 LYYRGNVVGEAGIPGGEVSPGETIEVITSLTVLADRLISNSNLYSDVISGNLSVTTYTKI 159
L YRG V+GEA +P ++ +T+ + +LT++ADRL+S + L SDV++G + + T+ K+
Sbjct: 134 LNYRGQVIGEAPLPANRIAARKTVPLNITLTLMADRLLSETQLLSDVMAGVIPLNTFVKV 193
Query: 160 SGRVSVLKIFKHHLVSYTTCDISLDVYNRIVKKSECKYKTKL 201
+G+V+VLKIFK + S ++CD+S+ V +R V CKY TKL
Sbjct: 194 TGKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQHCKYSTKL 235
>AT2G46150.1 | Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family | Chr2:18961424-18962089 FORWARD
LENGTH=221 | 201606
Length = 221
Score = 106 bits (265), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 116/195 (59%), Gaps = 10/195 (5%)
Query: 14 HPKKRNLCCGLILFLIGIVLLIVILG--FTIFKPKHTITKVNSIKLDGLKV---SLDVPR 68
H + + C + + ++L ++L FT+F+ K I K+N + ++GL + V
Sbjct: 30 HRSRNRIKCSICVTATSLILTTIVLTLVFTVFRVKDPIIKMNGVMVNGLDSVTGTNQVQL 89
Query: 69 LGVDLNITLILNLSVKNPNKAGFKYGNGSTLLYYRGNVVGEA-GIPGGEVSPGETIEVIT 127
LG NI++I+++SVKNPN A FKY N +T +YY+G +VGEA G+P G+ P T +
Sbjct: 90 LGT--NISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLP-GKARPHRTSRMNV 146
Query: 128 SLTVLADRLISNSNLYSDVI-SGNLSVTTYTKISGRVSVLKIFKHHLVSYTTCDISLDVY 186
++ ++ DR++S+ L ++ SG ++V +YT++ G+V ++ I K H+ C +++++
Sbjct: 147 TVDIMLDRILSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVKMNCTMAVNIT 206
Query: 187 NRIVKKSECKYKTKL 201
+ ++ +CK K L
Sbjct: 207 GQAIQDVDCKKKIDL 221
>AT3G05975.1 | Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family | Chr3:1792145-1792714 REVERSE
LENGTH=189 | 201606
Length = 189
Score = 104 bits (260), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 106/188 (56%), Gaps = 4/188 (2%)
Query: 17 KRNLCCGL--ILFLIGIVLLIVILGFTIFKPKHTITKVNSIKLDGLKVSLDVPRLGVDLN 74
KR +CC + I+F++ ++ + ++ +FKPKH I + S +DG+ ++ +P V LN
Sbjct: 3 KRRICCIVSGIIFVLFVIFMTALILAQVFKPKHPILQTVSSTVDGISTNISLPY-EVQLN 61
Query: 75 ITLILNLSVKNPNKAGFKYGNGSTLLYYRGNVVGEAGIPGGEVSPGETIEVITSLTVLAD 134
TL L + +KNPN A F+Y L+YYR +VG +P + ++ + L + D
Sbjct: 62 FTLTLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLD 121
Query: 135 RLISN-SNLYSDVISGNLSVTTYTKISGRVSVLKIFKHHLVSYTTCDISLDVYNRIVKKS 193
+ ++N ++ DV+ G + + T K+ G++++L IFK L S + C++ L + +V+
Sbjct: 122 KFVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVEDQ 181
Query: 194 ECKYKTKL 201
C KTKL
Sbjct: 182 VCDLKTKL 189
>AT4G23930.1 | Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family | Chr4:12436131-12436694 REVERSE
LENGTH=187 | 201606
Length = 187
Score = 71.2 bits (173), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 21 CCGLILFLIGIVLLIVILGFTIFKPKHTITKVNSIKLDGLKVSLDVPRLGVDLNITLILN 80
C LF++ +++ + + T+F+P+ V S+K+ V+ ++ T
Sbjct: 11 CAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVA------NSSVSFTFSQF 64
Query: 81 LSVKNPNKAGFKYGNGSTLLYYRGNVVGEAGIPGGEVSPGETIEVITSLTVLADRLISNS 140
+V+NPN+A F + N L+Y GN +G +P GE+ G T ++ + +V + L + S
Sbjct: 65 SAVRNPNRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPLAAAS 124
Query: 141 NLY--------SDVISGNLSVTTYTKISGRVSVLKIFKHHLVSYTTCDISLD 184
+ SD + + + +++GRV VL +F H + + C I++
Sbjct: 125 SSQISAAQFQNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCRIAIS 176
>AT1G64065.1 | Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family | Chr1:23778628-23779272 FORWARD
LENGTH=214 | 201606
Length = 214
Score = 50.8 bits (120), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 73 LNITLILNLSVKNPNKAGFKYGNGS-TLLYYRGNVVGEAGIPGGEVSPGETIEVITSLTV 131
N TL+ ++S++N N F++ + + ++Y VVGE I G V +T+ + +
Sbjct: 90 FNATLVSDISIRNSNFGAFEFEDSTLRVVYADHGVVGETKIEGRRVEAHKTVRITGVVVE 149
Query: 132 LAD-RLISNSNLYSDVISGNLSVTTYTKISGRVSVLKIFKHHLVSYTTCDISLDVYNRIV 190
+ RL+ +L D+ G L + + ++ GR+ VL K VS +C + L++ R +
Sbjct: 150 IGSFRLLDTKDLDKDLRLGFLELRSVAEVRGRIKVLG-RKRWKVSVMSCTMRLNLTGRFI 208
Query: 191 KKSECK 196
+ C+
Sbjct: 209 QNLLCE 214