BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1560.1
(388 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 56 7e-09
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 54 9e-08
AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 53 1e-07
AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 51 2e-07
AT3G09510.1 | Ribonuclease H-like superfamily protein | Chr3:292... 51 1e-06
>AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr1:9706657-9707298 REVERSE
LENGTH=213 | 201606
Length = 213
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 225 NDDKWKPPQQNFIKINVDASFTN--IISNMGISLIAHNDNSRFMGAQVKSHRSRNSEEAE 282
N D+W+ P++ +IK N D SF N + S G ++ ++ S + Q + N+ E+E
Sbjct: 48 NHDRWRRPERGWIKCNFDGSFVNGDVKSKAGW-VVRDSNGSYLLAGQAIGRKVDNALESE 106
Query: 283 AMAILLGIEWAKEANLTSIIIESDNKNLIQHLIDKNQAVQWQSQSHLKKIKELKKEFQTI 342
A+++ ++ + E DNK L LI+ ++ V + + ++ I ++F++I
Sbjct: 107 IQALIISMQHCWSHGYKRVCFEGDNKMLFD-LINGSK-VYFGVHNWIRDIHWWLRKFESI 164
Query: 343 RFTHTRRELNSHAGLLAR 360
F RR N+ A +LA+
Sbjct: 165 HFNWIRRHHNTPADILAK 182
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 9/186 (4%)
Query: 202 LPSSIQNQHDLEGRNIKTKQIPTNDDKWKPPQQNFIKINVDASFTNIISNMGISLIAHND 261
L +++ N+ RN P+ + KW PP ++ +K N DAS + G+ I N
Sbjct: 82 LDNTMTNEQQNGNRNAD----PSRNTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNS 137
Query: 262 NSRFMGAQVKSHRSR-NSEEAEAMAILLGIEWAKEANLTSIIIESDNKNLIQHLIDKNQA 320
+ + + R +EEAE ++ I+ + +I E DN+ + + + K+
Sbjct: 138 QGTVIECGMGKFQGRMTTEEAECSTLIWAIQASYGFGHKKVIFEGDNQTITRMINTKSSN 197
Query: 321 VQWQSQSHLKKIKELKKEFQTIRFTHTRRELNSHAGLLARWARKKGKN-KVWRNVPCILA 379
+ Q L I+ F++I F+ RE N A LA+ A K+ ++ + P L+
Sbjct: 198 P--RLQHFLDTIQSWIPSFESIEFSFKHREQNGCADFLAKQAIKENTQWSLFHSCPYFLS 255
Query: 380 NKYCNN 385
Y NN
Sbjct: 256 -PYVNN 260
>AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:14484959-14485837 FORWARD
LENGTH=292 | 201606
Length = 292
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 208 NQHDLEGRNIKTKQIPTN-DDKWKPPQQNFIKINVDASFTNIISNMGISLIAHNDNSR-- 264
+ +LEG+ Q+ N +WK P ++K N DA++ GI I N++
Sbjct: 116 TRRELEGK-ASGPQVERNLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVL 174
Query: 265 FMGAQVKSHRSRNSEEAEAMAILLGIEWAKEANLTSIIIESDNKNLIQHLIDKNQAVQWQ 324
+MGA+ R++N EAE A+ + N II ESD + L+ L N W
Sbjct: 175 WMGARALP-RTKNVLEAELEALRWAVLTMSRFNYKRIIFESDAQALVNLL---NSDDFWP 230
Query: 325 S-QSHLKKIKELKKEFQTIRFTHTRRELNSHAGLLAR 360
+ Q L+ I++L F+ ++F T R N A +AR
Sbjct: 231 TLQPALEDIQQLLHHFEEVKFEFTPRGGNKVADRIAR 267
>AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr3:8344629-8345204 FORWARD
LENGTH=191 | 201606
Length = 191
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Query: 216 NIKTKQIPTN-DDKWKPPQQNFIKINVDASFTNIISNMGISLIAHNDNSRFMGAQVKSHR 274
N+K Q ++ DKW+ P ++K N D S + G+ I N + +
Sbjct: 16 NVKGGQTKSSRTDKWQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQGTCLDCGCGKFQ 75
Query: 275 SRNS-EEAEAMAILLGIEWAKEANLTSIIIESDNKNLIQHLIDKNQAVQWQSQSHLKKIK 333
R + +EAE A++ I+ A + + E DN + LI +N+ + + +L+ I+
Sbjct: 76 GRQTIKEAECTALIWAIQCAWDLGYRRVEFEGDNIT-VNRLI-RNKETNPRLRYYLEFIQ 133
Query: 334 ELKKEFQTIRFTHTRRELNSHAGLLAR 360
+ K F T++FT RE N +LA+
Sbjct: 134 QWSKAFTTVKFTFRHREQNVCVDVLAK 160
>AT3G09510.1 | Ribonuclease H-like superfamily protein |
Chr3:2921804-2923258 FORWARD LENGTH=484 | 201606
Length = 484
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 7/147 (4%)
Query: 219 TKQIPTNDDKWKPPQQNFIKINVDASF-TNIISNMGISLIAHNDNSRFMGAQVKSHRSRN 277
T+QI N +W+ P ++K N DA F + G +I ++ + +K + N
Sbjct: 316 TRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSN 375
Query: 278 SEEAEAMAILLGIEWAKEANLTSIIIESDNKNLIQHLIDKNQAVQWQSQ--SHLKKIKEL 335
EAE A+L ++ T + +E D Q LI+ + + S +HL+ I
Sbjct: 376 PLEAETKALLAALQQTWIRGYTQVFMEGD----CQTLINLINGISFHSSLANHLEDISFW 431
Query: 336 KKEFQTIRFTHTRRELNSHAGLLARWA 362
+F +I+F RR+ N A +LA++
Sbjct: 432 ANKFASIQFGFIRRKGNKLAHVLAKYG 458