BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1590.1
(173 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 72 6e-15
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 72 6e-15
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 45 9e-06
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 72.4 bits (176), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 14 LEGYSDASWNSIETKSKSTTGWIFTLGGAAVSWGSKKQTIISDSTMLSELIALADASKEA 73
L+ +SDAS+ S + +ST G+ LG + +SW SKKQ ++S S+ +E AL+ A+ E
Sbjct: 442 LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEM 501
Query: 74 EWLRNLLEEIPI-WKKPSPSVMINCDNQATLYNVANKTYNGKSRHVSLRHQFVRQ 127
WL E+ + KP+ ++ CDN A ++ N ++ +++H+ VR+
Sbjct: 502 MWLAQFFRELQLPLSKPT---LLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 72.4 bits (176), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 14 LEGYSDASWNSIETKSKSTTGWIFTLGGAAVSWGSKKQTIISDSTMLSELIALADASKEA 73
L+ +SDAS+ S + +ST G+ LG + +SW SKKQ ++S S+ +E AL+ A+ E
Sbjct: 442 LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEM 501
Query: 74 EWLRNLLEEIPI-WKKPSPSVMINCDNQATLYNVANKTYNGKSRHVSLRHQFVRQ 127
WL E+ + KP+ ++ CDN A ++ N ++ +++H+ VR+
Sbjct: 502 MWLAQFFRELQLPLSKPT---LLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 3 YGLHFKGDPAI-LEGYSDASWNSIETKSKSTTGWIFTLGGAAVSWGSKKQTIISDSTMLS 61
+GL+ + + ++ + D+ W + +STTG+ LG +SW +K+Q +S S+ +
Sbjct: 152 HGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTET 211
Query: 62 ELIALADASKEAEW 75
E ALA + E W
Sbjct: 212 EYRALALTAAELTW 225