BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000108.1_g1600.1
         (623 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G20980.1 | Gag-Pol-related retrotransposon family protein | C...    59   5e-09
AT3G21000.1 | Gag-Pol-related retrotransposon family protein | C...    50   5e-06

>AT3G20980.1 | Gag-Pol-related retrotransposon family protein |
           Chr3:7355963-7357966 FORWARD LENGTH=405 | 201606
          Length = 405

 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 7/109 (6%)

Query: 197 CYHDTDVTDNVWYLDSGASKHMTGNKSLFSKLIESDNGQVKI--GD---ARTYKIRGIGE 251
           C+      +N+W + S  S HMT +   F+ L  S   +VK   GD        + GIG+
Sbjct: 258 CFSKYTFHENIWLISSTNSNHMTPHVKFFTTLDRSRKCKVKFISGDKSETTVAMVEGIGD 317

Query: 252 ISFHTKSANIEKMSEVYYVPGLKNNLLSIGHLLRKGYDIHFHDNT-CYL 299
           ++F T   N + +  V YVPG++ N LS+  L R G+++     T C++
Sbjct: 318 VTFITNEGN-KTIKNVLYVPGIEGNALSVSQLKRNGFEVSMERRTGCFV 365


>AT3G21000.1 | Gag-Pol-related retrotransposon family protein |
           Chr3:7363921-7365138 FORWARD LENGTH=405 | 201606
          Length = 405

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 11/142 (7%)

Query: 151 CYNCHKPGHTAKECRYKQDNYDESCFMNENNDDANEKDHPETF--LLACYHDTDVTDNVW 208
           C  C+K  H  ++C+++     E     E  D+       ET   L A  +D    D++W
Sbjct: 230 CGLCYKNNHNQEDCKFRIHTDKE-----EKEDEIVVDYRLETVPNLGAKTYD----DDIW 280

Query: 209 YLDSGASKHMTGNKSLFSKLIESDNGQVKIGDARTYKIRGIGEISFHTKSANIEKMSEVY 268
            +   A  +MT     F+ L  +    V   D     + G G++    K    + +  V 
Sbjct: 281 IIHKMAPINMTPYVKYFTTLDRTFKATVGTVDGTVLLVEGKGDVKIRMKEGKKKTIRNVI 340

Query: 269 YVPGLKNNLLSIGHLLRKGYDI 290
           +VPGL  N+LS G ++ K Y I
Sbjct: 341 FVPGLNRNVLSFGKMVSKRYSI 362

Top