BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1660.1
(357 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 231 4e-68
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 231 4e-68
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 159 8e-47
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 80 3e-18
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 231 bits (589), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 189/344 (54%), Gaps = 33/344 (9%)
Query: 1 MSQPPGFR----DKKFPNYVCKLHKSLYGLKQAPRAWYEELAEALVSLGFDMSSSDSSLF 56
M PPG+ D PN VC L KS+YGLKQA R W+ + + L+ GF S SD + F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 57 VQYQNGMITIILVYVDDILVTGSSLDHCNVLIKQLGTRFAMKDLGSLHYFLGLEVTRSSK 116
++ + +LVYVDDI++ ++ + L QL + F ++DLG L YFLGLE+ RS+
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 117 GMMISQQKYILDLLEKTGMAGVKPCFSPIASGSKLLKRDGHPLANPTEYRSIVGALQYLT 176
G+ I Q+KY LDLL++TG+ G KP P+ G + YR ++G L YL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 177 WTRPELSFAVNQLSQHMQAPTDIHMAAVKRVLRYLKGSLTQGLLLAPTS-LQVECFSDSD 235
TR ++SFAVN+LSQ +AP H AV ++L Y+KG++ QGL + + +Q++ FSD+
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 236 WAGNPEDARSV----------------------------GEYRSLAQAAAETIWITKILK 267
+ + RS EYR+L+ A E +W+ + +
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFR 509
Query: 268 DLHVFLPQAPQLWCDNQSAVSLASNPVFHSKIKHVAVDFHFIRD 311
+L + L + L+CDN +A+ +A+N VFH + KH+ D H +R+
Sbjct: 510 ELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 231 bits (589), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 189/344 (54%), Gaps = 33/344 (9%)
Query: 1 MSQPPGFR----DKKFPNYVCKLHKSLYGLKQAPRAWYEELAEALVSLGFDMSSSDSSLF 56
M PPG+ D PN VC L KS+YGLKQA R W+ + + L+ GF S SD + F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 57 VQYQNGMITIILVYVDDILVTGSSLDHCNVLIKQLGTRFAMKDLGSLHYFLGLEVTRSSK 116
++ + +LVYVDDI++ ++ + L QL + F ++DLG L YFLGLE+ RS+
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 117 GMMISQQKYILDLLEKTGMAGVKPCFSPIASGSKLLKRDGHPLANPTEYRSIVGALQYLT 176
G+ I Q+KY LDLL++TG+ G KP P+ G + YR ++G L YL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 177 WTRPELSFAVNQLSQHMQAPTDIHMAAVKRVLRYLKGSLTQGLLLAPTS-LQVECFSDSD 235
TR ++SFAVN+LSQ +AP H AV ++L Y+KG++ QGL + + +Q++ FSD+
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 236 WAGNPEDARSV----------------------------GEYRSLAQAAAETIWITKILK 267
+ + RS EYR+L+ A E +W+ + +
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFR 509
Query: 268 DLHVFLPQAPQLWCDNQSAVSLASNPVFHSKIKHVAVDFHFIRD 311
+L + L + L+CDN +A+ +A+N VFH + KH+ D H +R+
Sbjct: 510 ELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 159 bits (403), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 126/225 (56%), Gaps = 32/225 (14%)
Query: 67 ILVYVDDILVTGSSLDHCNVLIKQLGTRFAMKDLGSLHYFLGLEVTRSSKGMMISQQKYI 126
+L+YVDDIL+TGSS N+LI QL + F+MKDLG +HYFLG+++ G+ +SQ KY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 127 LDLLEKTGMAGVKPCFSPIA-SGSKLLKRDGHPLANPTEYRSIVGALQYLTWTRPELSFA 185
+L GM KP +P+ + + +P +P+++RSIVGALQYLT TRP++S+A
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP--DPSDFRSIVGALQYLTLTRPDISYA 120
Query: 186 VNQLSQHMQAPTDIHMAAVKRVLRYLKGSLTQGLLLAPTS-LQVECFSDSDWAGNPEDAR 244
VN + Q M PT +KRVLRY+KG++ GL + S L V+ F DSDWAG R
Sbjct: 121 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRR 180
Query: 245 SV----------------------------GEYRSLAQAAAETIW 261
S EYR+LA AAE W
Sbjct: 181 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 79.7 bits (195), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 174 YLTWTRPELSFAVNQLSQHMQAPTDIHMAAVKRVLRYLKGSLTQGLLLAPTS-LQVECFS 232
YLT TRP+L+FAVN+LSQ A M AV +VL Y+KG++ QGL + TS LQ++ F+
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 233 DSDWAGNPEDARSVGEYRSL 252
DSDWA P+ RSV + SL
Sbjct: 62 DSDWASCPDTRRSVTGFCSL 81