BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1690.1
(222 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G23710.1 | hypothetical protein (DUF1645) | Chr1:8385363-8386... 67 4e-13
AT1G70420.1 | DNA ligase-like protein%2C putative (DUF1645) | Ch... 58 6e-10
AT5G62770.1 | membrane-associated kinase regulator%2C putative (... 53 3e-08
>AT1G23710.1 | hypothetical protein (DUF1645) | Chr1:8385363-8386250
FORWARD LENGTH=295 | 201606
Length = 295
Score = 67.4 bits (163), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 87 FSFVCRDLDESPISADRIFVNGQIRPVFAVFNQDLVFSRDDHLVDDSKPNKSI----RVS 142
FSF C + + SPI+AD F +GQIRPVF +FN+DL+F ++ DD N S+ R
Sbjct: 65 FSFACVNGEGSPITADEAFEDGQIRPVFPLFNRDLLFEYENE--DDKNDNVSVTDENRPR 122
Query: 143 LKNLFREERESSNPPSSSSSEIDELENLPEGTYCIWT 179
L+ LF E+R + E + E P G YC WT
Sbjct: 123 LRKLFVEDRNG----NGDGEETEGSEKEPLGPYCSWT 155
>AT1G70420.1 | DNA ligase-like protein%2C putative (DUF1645) |
Chr1:26539840-26540658 REVERSE LENGTH=272 | 201606
Length = 272
Score = 58.2 bits (139), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 31 EEFVDDREELGLEPVSKEKVFSHHHEEQNRLGKEVDGDDDSGKNEEINDGNDDDFE--FS 88
E F + EL + SK K+ S EE+NR DDDS N+ D +D+ E FS
Sbjct: 17 ERFSEVYGELNDDFGSKLKISSK--EEENR-------DDDSWWNQNGTDKDDEGREEDFS 67
Query: 89 FVCRDLDESPISADRIFVNGQIRPVFAVFNQDLVFSRDDHLVDDSKPNKSIRVSLKNLF 147
F + D SPI+AD F +GQIRPV+ +FN+++ F D K++R LK LF
Sbjct: 68 FASVNADNSPITADEAFEDGQIRPVYPLFNRNIFF--------DDPEEKTLRSPLKKLF 118
>AT5G62770.1 | membrane-associated kinase regulator%2C putative
(DUF1645) | Chr5:25210564-25211370 FORWARD LENGTH=268 |
201606
Length = 268
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 70/182 (38%), Gaps = 46/182 (25%)
Query: 6 SIFGESPSFTSYSSN-SFAEITAKVCEEFVDDREELGLEPVSKEKVFSHHHEEQNRLGKE 64
S SPSF S+SS A I A+V EEF D H + Q
Sbjct: 8 SFSSNSPSFGSFSSAVDLAAIAARVVEEFRD------------------HDQTQ------ 43
Query: 65 VDGDDDSGKNEEINDGNDDDFEFSFVCRDLDESPISADRIFVNGQIRPVFAVFNQDLVFS 124
S + +D ND DF F + +AD IF NGQIRP+ V
Sbjct: 44 ------SDSSPHRDDDNDSDFAFDCPSNTCSQPLATADEIFCNGQIRPLNPYGGNAPV-- 95
Query: 125 RDDHLVDDSKPNKSIRVSLKNLFREER-----ESSNPPSSSSSEIDE-LENLPEGTYCIW 178
+S+P I R E +P S+SSSE +E L +P TYC+W
Sbjct: 96 -------ESQPTSKITTLPPRRRRPALRKLMSEDRDPASNSSSEAEEDLTGVPPETYCVW 148
Query: 179 TP 180
P
Sbjct: 149 KP 150