BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000108.1_g1710.1
         (294 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G25270.1 | Ribonuclease H-like superfamily protein | Chr3:920...    62   8e-11

>AT3G25270.1 | Ribonuclease H-like superfamily protein |
           Chr3:9203934-9204965 REVERSE LENGTH=343 | 201606
          Length = 343

 Score = 62.4 bits (150), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 112/273 (41%), Gaps = 25/273 (9%)

Query: 1   LFGCPFTVQIWATLLSLLGFNHISASSWETEITWCLQHFLGSTLLARLGRLVFNA---FL 57
            F C +  Q+W       G  H    +    +   ++  L S L  R  +L FN     L
Sbjct: 70  FFDCFYAQQVWRAS----GIPHQELRTTGITMETKMELLLSSCLANRQPQL-FNLAIWIL 124

Query: 58  YHVWIERNNRIFRSTASSPSVIVGRIRDEVKIKIAFDKPVIEDTIDNRRVVERWNLSIQL 117
           + +W  RN  +F+  + S    + R R++V+          EDT    + + +   S + 
Sbjct: 125 WRLWKSRNQLVFQQKSISWQNTLQRARNDVQ--------EWEDTNTYVQSLNQQVHSSRH 176

Query: 118 THPTYKFYKWVGPEPGRVTINTDGALSDTF--AGYGAIIRDASGTVLGAGTA--ETTRET 173
             PT    KW  P    +  N DGA +     A  G ++RD +G  +G+G A   TT ++
Sbjct: 177 QQPTMARTKWQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDS 236

Query: 174 IFIHELQGVEMGMKIAQSLGFDDIEIGLDSKNVASLLAAPGQQPPWKARGLWNRVKRL-K 232
           +   E Q + + M+ A S G+  +    DSK V  L+           R  W R  R  +
Sbjct: 237 L-ESEFQALIIAMQHAWSQGYRKVIFEGDSKQVEELMNNEKLN---FGRFNWIREGRFWQ 292

Query: 233 ANFRSVRVQHIVRETNQAADYLSKLKRGPGETF 265
             F     + + R  NQ AD L+K    P ++F
Sbjct: 293 KRFEEAVFKWVPRTNNQPADILAKHHLQPNQSF 325

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