BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1750.1
(165 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G01840.1 | AP2-like ethylene-responsive transcription factor ... 114 1e-32
>AT1G01840.1 | AP2-like ethylene-responsive transcription factor SNZ
| Chr1:303650-304108 FORWARD LENGTH=152 | 201606
Length = 152
Score = 114 bits (284), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 101/162 (62%), Gaps = 16/162 (9%)
Query: 7 VPPLTELVTALEQATLMTKQLPSSTDPTQIFQLCSSLQNAHHQINTFLSRFNSCQQPQAG 66
+ + EL+++LEQATLM +Q+ ++ Q+ Q+ SSL+ AH +++ FL+ + +
Sbjct: 4 IEQVAELISSLEQATLMAQQIGTTVGQNQLLQI-SSLRIAHQRLSAFLASIPTAE----A 58
Query: 67 ENSLSSAAGDVGEPMEVGD---GGDEIAEEDNNSKSIIDKVEERMKNCYLQNKRRKRPLS 123
E S SS EPM++G+ G E AEE+ S I+KVEE+M+ C+++NKR KRPLS
Sbjct: 59 EKSFSSV-----EPMQLGEEEKGEAEPAEEERYSA--IEKVEEKMRECFIRNKRLKRPLS 111
Query: 124 PSSVAVDQRIFDDDGLLVQGVSEFDPQATRLRALDLIYQFHG 165
PSS V+ ++ G + DP AT+LRALDLIYQFH
Sbjct: 112 PSSAVVETSATEERSGRDYGF-DSDPHATKLRALDLIYQFHA 152