BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1760.1
(709 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G67710.1 | response regulator 11 | Chr1:25376994-25378905 REV... 84 9e-17
AT3G16857.2 | response regulator 1 | Chr3:5756113-5759139 FORWAR... 82 1e-15
AT3G16857.1 | response regulator 1 | Chr3:5756113-5758853 FORWAR... 82 1e-15
AT2G25180.1 | response regulator 12 | Chr2:10724490-10726961 REV... 81 1e-15
AT4G31920.1 | response regulator 10 | Chr4:15444290-15446766 REV... 79 5e-15
>AT1G67710.1 | response regulator 11 | Chr1:25376994-25378905
REVERSE LENGTH=521 | 201606
Length = 521
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Query: 27 GYHILVIDNNSEYLLELTNLLQYFQYEVLAVREASAGIRAIKNNKNGEFDLVLADDNLPN 86
G +LV+D++ +L L +L+ YEV A +R ++ K+G +D+V++D N+P+
Sbjct: 10 GLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDG-YDIVISDVNMPD 68
Query: 87 MKAPKLVHHVNNVFKLPIVLMAGKANYKVMVPRLDNGVCLYLTKPLTETNVQILWQYAAR 146
M KL+ HV LP+++M+ ++ + +G C YL KP+ ++I+WQ+ R
Sbjct: 69 MDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLR 128
Query: 147 AKM 149
K+
Sbjct: 129 KKL 131
>AT3G16857.2 | response regulator 1 | Chr3:5756113-5759139 FORWARD
LENGTH=690 | 201606
Length = 690
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Query: 26 SGYHILVIDNNSEYLLELTNLLQYFQYEVLAVREASAGIRAIKNNKNGEFDLVLADDNLP 85
SG +LV+D++ L+ L +L+ YEV A + ++ NK+G FD+V++D ++P
Sbjct: 35 SGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHG-FDIVISDVHMP 93
Query: 86 NMKAPKLVHHVNNVFKLPIVLMAGKANYKVMVPRLDNGVCLYLTKPLTETNVQILWQYAA 145
+M KL+ HV LP+++M+ + V++ + +G YL KP+ ++ +WQ+
Sbjct: 94 DMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVV 153
Query: 146 RAK 148
R +
Sbjct: 154 RKR 156
>AT3G16857.1 | response regulator 1 | Chr3:5756113-5758853 FORWARD
LENGTH=669 | 201606
Length = 669
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Query: 26 SGYHILVIDNNSEYLLELTNLLQYFQYEVLAVREASAGIRAIKNNKNGEFDLVLADDNLP 85
SG +LV+D++ L+ L +L+ YEV A + ++ NK+G FD+V++D ++P
Sbjct: 35 SGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHG-FDIVISDVHMP 93
Query: 86 NMKAPKLVHHVNNVFKLPIVLMAGKANYKVMVPRLDNGVCLYLTKPLTETNVQILWQYAA 145
+M KL+ HV LP+++M+ + V++ + +G YL KP+ ++ +WQ+
Sbjct: 94 DMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVV 153
Query: 146 RAK 148
R +
Sbjct: 154 RKR 156
>AT2G25180.1 | response regulator 12 | Chr2:10724490-10726961
REVERSE LENGTH=596 | 201606
Length = 596
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Query: 27 GYHILVIDNNSEYLLELTNLLQYFQYEVLAVREASAGIRAIKNNKNGEFDLVLADDNLPN 86
G +L +D++ L L +LL++ QY V +A + ++ NKN +FDLV++D ++P+
Sbjct: 16 GMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKN-KFDLVISDVDMPD 74
Query: 87 MKAPKLVHHVNNVFKLPIVLMAGKANYKVMVPRLDNGVCLYLTKPLTETNVQILWQYAAR 146
M KL+ V LP+++++ ++ K ++ + +G C YL KP+ ++ +WQ+ R
Sbjct: 75 MDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVR 134
Query: 147 AKM 149
++
Sbjct: 135 SRF 137
>AT4G31920.1 | response regulator 10 | Chr4:15444290-15446766
REVERSE LENGTH=552 | 201606
Length = 552
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
Query: 27 GYHILVIDNNSEYLLELTNLLQYFQYEVLAVREASAGIRAIKNNKNGEFDLVLADDNLPN 86
G +L +D++ L L LLQ QY V +A + ++ NKN +FDLV++D ++P+
Sbjct: 16 GMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKN-KFDLVISDVDMPD 74
Query: 87 MKAPKLVHHVNNVFKLPIVLMAGKANYKVMVPRLDNGVCLYLTKPLTETNVQILWQYAAR 146
M KL+ V LP+++++ ++ K ++ + +G C YL KP+ ++ +WQ+ R
Sbjct: 75 MDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVVR 134