BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1780.1
(213 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G11380.1 | PLAC8 family protein | Chr1:3832695-3833921 FORWAR... 57 7e-10
>AT1G11380.1 | PLAC8 family protein | Chr1:3832695-3833921 FORWARD
LENGTH=254 | 201606
Length = 254
Score = 57.4 bits (137), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 11/78 (14%)
Query: 22 MAAMDFDLLSSTVALQTQNG----EIDGGR------FNGGVQRMWDGDVLVCFQDRRIAL 71
++ +DFDLL STVALQTQ E G + GGV R+W+GDV+ CF+DR + +
Sbjct: 42 ISVLDFDLLCSTVALQTQGKWRKLESSEGEDATEDDYGGGVLRLWEGDVMDCFEDRHLCI 101
Query: 72 ET-ICKRTRVRKDALRNG 88
E+ C R K+ R G
Sbjct: 102 ESACCPCYRFGKNMTRTG 119