BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1830.1
(341 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 112 9e-27
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 112 9e-27
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 57 5e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 112 bits (279), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 13/213 (6%)
Query: 2 NLEIEQLDVKTVFLHGDLEEVVYMEQPTEFEVKGKEHL----ICKLDKSLYGLKQAPRQW 57
N + QLD+ FL+GDL+E +YM+ P + + + L +C L KS+YGLKQA RQW
Sbjct: 187 NFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQW 246
Query: 58 HKKFESFMKDQGYHRTASDHCVFVHKFPDGDLIILLLYVDDMLIVGQDANKISRLKKELN 117
KF + G+ ++ SDH F+ K + +L+YVDD++I + + LK +L
Sbjct: 247 FLKFSVTLIGFGFVQSHSDHTYFL-KITATLFLCVLVYVDDIIICSNNDAAVDELKSQLK 305
Query: 118 KYFDMKDWGPAKQILGTHISHYRKAGKLCLSQERYIEKVLERFNMNKTKLVSCPLASHFK 177
F ++D GP K LG I+ R A + + Q +Y +L+ + K S P+
Sbjct: 306 SCFKLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVT 363
Query: 178 LTRDQCPSTRSEKEEIEKITYASVVESLMYAMV 210
S S + ++ Y ++ LMY +
Sbjct: 364 F------SAHSGGDFVDAKAYRRLIGRLMYLQI 390
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 207 YAMVWGA--VSWQSKLQKCVALSNTEAEYIAITECCKDMLWVKRLLEELGMK-QDNYVIH 263
Y M G +SW+SK Q+ V+ S+ EAEY A++ +M+W+ + EL + ++
Sbjct: 463 YCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLF 522
Query: 264 CDSQSAINLSKNSSFHSKSKHI 285
CD+ +AI+++ N+ FH ++KHI
Sbjct: 523 CDNTAAIHIATNAVFHERTKHI 544
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 112 bits (279), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 13/213 (6%)
Query: 2 NLEIEQLDVKTVFLHGDLEEVVYMEQPTEFEVKGKEHL----ICKLDKSLYGLKQAPRQW 57
N + QLD+ FL+GDL+E +YM+ P + + + L +C L KS+YGLKQA RQW
Sbjct: 187 NFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQW 246
Query: 58 HKKFESFMKDQGYHRTASDHCVFVHKFPDGDLIILLLYVDDMLIVGQDANKISRLKKELN 117
KF + G+ ++ SDH F+ K + +L+YVDD++I + + LK +L
Sbjct: 247 FLKFSVTLIGFGFVQSHSDHTYFL-KITATLFLCVLVYVDDIIICSNNDAAVDELKSQLK 305
Query: 118 KYFDMKDWGPAKQILGTHISHYRKAGKLCLSQERYIEKVLERFNMNKTKLVSCPLASHFK 177
F ++D GP K LG I+ R A + + Q +Y +L+ + K S P+
Sbjct: 306 SCFKLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVT 363
Query: 178 LTRDQCPSTRSEKEEIEKITYASVVESLMYAMV 210
S S + ++ Y ++ LMY +
Sbjct: 364 F------SAHSGGDFVDAKAYRRLIGRLMYLQI 390
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 207 YAMVWGA--VSWQSKLQKCVALSNTEAEYIAITECCKDMLWVKRLLEELGMK-QDNYVIH 263
Y M G +SW+SK Q+ V+ S+ EAEY A++ +M+W+ + EL + ++
Sbjct: 463 YCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLF 522
Query: 264 CDSQSAINLSKNSSFHSKSKHI 285
CD+ +AI+++ N+ FH ++KHI
Sbjct: 523 CDNTAAIHIATNAVFHERTKHI 544
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 9/116 (7%)
Query: 92 LLLYVDDMLIVGQDANKISRLKKELNKYFDMKDWGPAKQILGTHISHYRKAGKLCLSQER 151
LLLYVDD+L+ G ++ L +L+ F MKD GP LG I + L LSQ +
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQTK 60
Query: 152 YIEKVLERFNMNKTKLVSCPLASHFKLTRDQCPSTRSEKEEIEKITYASVVESLMY 207
Y E++L M K +S PL KL S+ S + + + S+V +L Y
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLP--LKLN-----SSVSTAKYPDPSDFRSIVGALQY 109