BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1940.1
(128 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G09870.1 | SAUR-like auxin-responsive protein family | Chr3:3... 87 6e-23
AT2G28085.1 | SAUR-like auxin-responsive protein family | Chr2:1... 75 4e-18
AT4G00880.1 | SAUR-like auxin-responsive protein family | Chr4:3... 59 4e-12
AT4G34780.1 | SAUR-like auxin-responsive protein family | Chr4:1... 59 5e-12
AT2G21210.1 | SAUR-like auxin-responsive protein family | Chr2:9... 57 2e-11
>AT3G09870.1 | SAUR-like auxin-responsive protein family |
Chr3:3027555-3027896 REVERSE LENGTH=113 | 201606
Length = 113
Score = 86.7 bits (213), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 74/111 (66%), Gaps = 4/111 (3%)
Query: 3 KLAVKKLWKTRSLSMTTRRVFDYSKIDFNEKIEKNVILGDGEEVKEGHFAVLAVEGKEPK 62
K+ ++KL + ++RV +Y +F E E N +VKEGH AV+AV+G+ K
Sbjct: 6 KIFMRKLQICCLFTRFSKRVGNYC--EFEE--EGNAASMIPSDVKEGHVAVIAVKGERIK 61
Query: 63 KFVLELSWLNNPAFLRLLEKAQEEFGFEQEGVLAVPCKPDDLKEMLSTNKK 113
+FVLEL LN P FLRLLE+A+EEFGF+ G L +PC+P++++++L +++
Sbjct: 62 RFVLELEELNKPEFLRLLEQAREEFGFQPRGPLTIPCQPEEVQKILQGSRE 112
>AT2G28085.1 | SAUR-like auxin-responsive protein family |
Chr2:11968182-11968556 REVERSE LENGTH=124 | 201606
Length = 124
Score = 74.7 bits (182), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 45 EVKEGHFAVLAVEG-KEP-KKFVLELSWLNNPAFLRLLEKAQEEFGFEQEGVLAVPCKPD 102
+VKEGHFAV+AV+G EP ++FV+ L +L +P F +LLE+A+EE+GF +G L VPC+P
Sbjct: 54 DVKEGHFAVIAVDGYHEPTQRFVVPLMFLEHPMFRKLLEQAEEEYGFYHDGALMVPCRPS 113
Query: 103 DLKEMLS 109
L+ +L+
Sbjct: 114 HLRMILT 120
>AT4G00880.1 | SAUR-like auxin-responsive protein family |
Chr4:366692-367060 REVERSE LENGTH=122 | 201606
Length = 122
Score = 59.3 bits (142), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 49/75 (65%)
Query: 42 DGEEVKEGHFAVLAVEGKEPKKFVLELSWLNNPAFLRLLEKAQEEFGFEQEGVLAVPCKP 101
D E+V +G AV +G+E ++FV+ + + N+P F +LL++A+EEFGF Q+G + +PC
Sbjct: 24 DHEKVPKGCLAVKVGQGEEQERFVIPVMYFNHPLFGQLLKEAEEEFGFAQKGTITIPCHV 83
Query: 102 DDLKEMLSTNKKKNV 116
++ + + ++N
Sbjct: 84 EEFRYVQGLIDRENT 98
>AT4G34780.1 | SAUR-like auxin-responsive protein family |
Chr4:16592397-16592717 REVERSE LENGTH=106 | 201606
Length = 106
Score = 58.5 bits (140), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 46 VKEGHFAVLAVEGK-EPKKFVLELSWLNNPAFLRLLEKAQEEFGFE-QEGVLAVPCKPD- 102
V++GHFAV E + E K+FV+ +S+LN+P F LL KA++EFG + Q L +PC D
Sbjct: 28 VRKGHFAVYVGEDEMETKRFVVPISYLNHPLFQALLRKAEDEFGTDHQRTYLTIPCAKDV 87
Query: 103 --DLKEMLSTNK 112
D+ L NK
Sbjct: 88 FLDITSRLKRNK 99
>AT2G21210.1 | SAUR-like auxin-responsive protein family |
Chr2:9085513-9085809 REVERSE LENGTH=98 | 201606
Length = 98
Score = 57.0 bits (136), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 46 VKEGHFAVLAVEGKEPKKFVLELSWLNNPAFLRLLEKAQEEFGFEQE-GVLAVPCKPD-- 102
+ +GH AV E + ++FV+ +++L++P F +LL KA+EEFGF+ G L +PC
Sbjct: 28 IPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQKLLRKAEEEFGFDHPMGGLTIPCTEQIF 87
Query: 103 -DLKEMLSTN 111
DL LST+
Sbjct: 88 IDLASRLSTS 97