BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1950.1
(458 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 96 1e-20
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 70 1e-12
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 148/335 (44%), Gaps = 20/335 (5%)
Query: 110 VMIGDLNSILDPTEKSGGSKGS--YSNITKILEIINKLGLLDLGYQGNPYTWSNKQLGEN 167
+++GD + I ++ + S + + + L+D+ +G YTWSN Q +N
Sbjct: 222 ILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQ-DDN 280
Query: 168 LIQERLDRALANLQWLHQFQS-YGVTHLEAVGSDHLPILLDNKDPSQTTPKPFKFIRTWM 226
I +LDRA+AN W F S V L V SDH P ++ ++ + + K F++
Sbjct: 281 PIIRKLDRAIANGDWFSSFPSAIAVFELSGV-SDHSPCIIILENLPKRSKKCFRYFSFLS 339
Query: 227 THPDCHNFIADNWK-HIKQYQNPNNIQQDLKKLSKQLSKWNKNVFGNIENNINQITKSLQ 285
THP + W+ I + ++ + LK K N+ FGNI++ + SL+
Sbjct: 340 THPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLE 399
Query: 286 NSKSK----------EEDHKLTLALEELYNQQESLWKEKSRNNFITLGDKNTKYFHSQAI 335
+ +S+ +H ES +++KSR ++ GD NT++FH +
Sbjct: 400 SIQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVIL 459
Query: 336 QRNRTNKISAIKDKDGDWHEDMKDIQD---TFTSHLLDI-STTINPREDQNTLNLFTPTI 391
N I ++ D E++ +++ + +HLL S + P Q ++
Sbjct: 460 ANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHPFRC 519
Query: 392 TQNQNRDLIAIPDKEEINWAIQSLKKEAAPGPDGY 426
L A+P +EI A+ ++ + APGPD +
Sbjct: 520 NDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSF 554
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 85/190 (44%), Gaps = 8/190 (4%)
Query: 95 WKTLSQLNQDQE---NPWVMIGDLNSILDPTEKSG--GSKGSYSNITKILEIINKLGLLD 149
W +++L+ +PW+++GD N I TE S S + + + L+D
Sbjct: 105 WDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDSDLVD 164
Query: 150 LGYQGNPYTWSNKQLGENLIQERLDRALANLQWLHQFQSYGVTHLEAVGSDHLP-ILLDN 208
L +G YTWSN Q +N I +LDRA+ N WL F + SDH +++ N
Sbjct: 165 LPCRGVLYTWSNHQ-QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMVILN 223
Query: 209 KDPSQTTPKPFKFIRTWMTHPDCHNFIADNW-KHIKQYQNPNNIQQDLKKLSKQLSKWNK 267
P + K FK+ THPD + I W K I ++ + LK+ K N+
Sbjct: 224 NSPPLSKKKSFKYFSFLSTHPDFISSILAAWQKEIAVGSFMFSLGELLKEAKKACRGLNR 283
Query: 268 NVFGNIENNI 277
F NI+ +
Sbjct: 284 RGFSNIQAQL 293