BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2030.1
(516 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50230.1 | Transducin/WD40 repeat-like superfamily protein | ... 747 0.0
AT3G49660.1 | Transducin/WD40 repeat-like superfamily protein | ... 121 2e-30
AT5G64730.1 | Transducin/WD40 repeat-like superfamily protein | ... 119 1e-29
AT2G43770.1 | Transducin/WD40 repeat-like superfamily protein | ... 101 3e-23
AT5G13480.2 | Transducin/WD40 repeat-like superfamily protein | ... 101 2e-22
>AT5G50230.1 | Transducin/WD40 repeat-like superfamily protein |
Chr5:20448632-20450855 REVERSE LENGTH=509 | 201606
Length = 509
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/506 (68%), Positives = 431/506 (85%)
Query: 11 DELAITAIKHALKSLRKRHLLEEGAHSPAFEALSRPFASQGSEWKEKAETLELELQQCYK 70
+E A+ AI AL++LRKRHLLEEGAH+PA ALS+P SQGSEWKEK E LE ELQQCYK
Sbjct: 4 EEKAMEAINDALRALRKRHLLEEGAHAPAISALSKPLISQGSEWKEKTEKLETELQQCYK 63
Query: 71 AQSRLSEQLVVEVAECRTAKALVQEKETLINDLQKEVTQAREESSQLKETLEEKINALDL 130
AQSRLSEQLV+EVAE RT+KA++QEKE LINDLQKE+TQ RE+ ++L+E LEEK +D+
Sbjct: 64 AQSRLSEQLVIEVAESRTSKAILQEKELLINDLQKELTQRREDCTRLQEELEEKTKTVDV 123
Query: 131 VVSENKVIKEQLEEAILKAKNAENENKMLIDRWMLQKMQDAERLNEANMLYEEMMNRVKA 190
+++EN I+ QLEE + + AE ENKMLIDRWMLQKMQDAERLNEAN LYEEM+ ++KA
Sbjct: 124 LIAENLEIRSQLEEMTSRVQKAETENKMLIDRWMLQKMQDAERLNEANDLYEEMLAKLKA 183
Query: 191 SSIEELALQQVDGVVRQFEAGAENFTGSTIPTECKHKILAHEGGCGSILFQYHSDKLITG 250
+ +E LA QQVDG+VR+ E G ++F STIP+ C ++I AHEGGCGSI+F+Y+S L TG
Sbjct: 184 NGLETLARQQVDGIVRRNEDGTDHFVESTIPSTCANRIHAHEGGCGSIVFEYNSGTLFTG 243
Query: 251 GQDRTVKLWDTKTGLLSRTLHGSLGSILDLSVTHDNRYIIAASSSNNLYVWDLGTGRIRH 310
GQDR VK+WDT +G L ++L+GSLG+ILD++VTHDN+ +IAA+SSNNL+VWD+ +GR+RH
Sbjct: 244 GQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRH 303
Query: 311 TLTGHTDKVCAVDVSKVSSSHVVSAAYDRTIKVWDLQRGYCVNTMISHSNCNSVCFSTDG 370
TLTGHTDKVCAVDVSK SS HVVSAAYDRTIK+WDL +GYC NT++ SNCN++C S DG
Sbjct: 304 TLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICLSIDG 363
Query: 371 LTICSGHVDGNLRLWDIKSGRLISEVAAHSNAITSICLSRSGNIVLTSGRDNLHNLFDIR 430
LT+ SGH+DGNLRLWDI++G+L+SEVA HS+A+TS+ LSR+GN +LTSGRDN+HN+FD R
Sbjct: 364 LTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTR 423
Query: 431 SLEVCGTLRANGNRVASNWSRSCLSADDNYVASGSSDGSVCVWSRSLANIVSTLKEDASP 490
+LE+CGTLRA+GNR+ASNWSRSC+S DD+YVA+GS+DGSV VWS S NIVS LKE SP
Sbjct: 424 TLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSP 483
Query: 491 ILSCAWSGLGKPLASANKNGTVYIWT 516
IL C+WSG+GKPLASA+KNG V WT
Sbjct: 484 ILCCSWSGIGKPLASADKNGYVCTWT 509
>AT3G49660.1 | Transducin/WD40 repeat-like superfamily protein |
Chr3:18413690-18415223 FORWARD LENGTH=317 | 201606
Length = 317
Score = 121 bits (304), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 132/258 (51%), Gaps = 10/258 (3%)
Query: 223 ECKHKILAHEGGCGSILFQYHSDKLITGGQDRTVKLWDTKTGLLSRTLHGSLGSILDLSV 282
E + HE G + F + +++ D+T+KLWD +TG L +TL G ++
Sbjct: 62 EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNF 121
Query: 283 THDNRYIIAASSSNNLYVWDLGTGRIRHTLTGHTDKVCAVDVSKVSSSHVVSAAYDRTIK 342
+ I++ S + +WD+ TG+ L H+D V AVD ++ S +VS++YD +
Sbjct: 122 NPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR-DGSLIVSSSYDGLCR 180
Query: 343 VWDLQRGYCVNTMISHSN--CNSVCFSTDGLTICSGHVDGNLRLWDIKSGRLISEVAAHS 400
+WD G+CV T+I N + V FS +G I G +D LRLW+I S + + H
Sbjct: 181 IWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHV 240
Query: 401 NA---ITSICLSRSGNIVLTSGRDNLHNLFDIRSLEVCGTLRANGNRVASNWSRSCLSAD 457
NA I+S +G +++ DN +++++ S ++ L + V + +C
Sbjct: 241 NAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVM---NVAC-HPT 296
Query: 458 DNYVASGSSDGSVCVWSR 475
+N +ASGS D +V +W++
Sbjct: 297 ENLIASGSLDKTVRIWTQ 314
Score = 109 bits (272), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 143/313 (45%), Gaps = 19/313 (6%)
Query: 216 TGSTIPTECKHKILAHEGGCGSILFQYHSDKLITGGQDRTVKLWDTKT-----GLLSRTL 270
T S P + +H S+ F L + D+T++ + T +
Sbjct: 8 TASFTPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEF 67
Query: 271 HGSLGSILDLSVTHDNRYIIAASSSNNLYVWDLGTGRIRHTLTGHTDKVCAVDVSKVSSS 330
G I D++ + D R+I++AS L +WD+ TG + TL GHT+ V+ + S+
Sbjct: 68 TGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP-QSN 126
Query: 331 HVVSAAYDRTIKVWDLQRGYCVNTMISHSN-CNSVCFSTDGLTICSGHVDGNLRLWDIKS 389
+VS ++D T+++WD+ G C+ + +HS+ +V F+ DG I S DG R+WD +
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT 186
Query: 390 GRLISEVAAHSNAITSIC-LSRSGNIVLTSGRDNLHNLFDIRSLEVCGTLRANGNRVASN 448
G + + N S S +G +L DN L++I S + T + N
Sbjct: 187 GHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVN----- 241
Query: 449 WSRSCLSA-----DDNYVASGSSDGSVCVWSRSLANIVSTLKEDASPILSCAWSGLGKPL 503
++ C+S+ + + SGS D V +W + ++ L+ +++ A +
Sbjct: 242 -AQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLI 300
Query: 504 ASANKNGTVYIWT 516
AS + + TV IWT
Sbjct: 301 ASGSLDKTVRIWT 313
>AT5G64730.1 | Transducin/WD40 repeat-like superfamily protein |
Chr5:25873146-25875021 FORWARD LENGTH=299 | 201606
Length = 299
Score = 119 bits (297), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 145/302 (48%), Gaps = 6/302 (1%)
Query: 215 FTGSTIPTECKHKILAHEGGCGSILFQYHSDKLITGGQDRTVKLWDTKTGLLSRTLHGSL 274
+ + +PT+ H + HEG + F + +T G+DRT++LW+ G+L +T
Sbjct: 1 MSATELPTKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHG 60
Query: 275 GSILDLSVTHDNRYIIAASSSNNLYVWDLGTGRIRHTLTGHTDKVCAVDVSKVSSSHVVS 334
+ D+ VT DN + +Y WD+ TGR+ GH +V AV + SSS VVS
Sbjct: 61 REVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFND-SSSVVVS 119
Query: 335 AAYDRTIKVWDLQRGYCVNTMISHSNCNSVCFSTDGLT-ICSGHVDGNLRLWDIKSGRLI 393
A +DR+++VWD + I + ++V T I G VDG +R +D++ GR +
Sbjct: 120 AGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREM 179
Query: 394 SEVAAHSNAITSICLSRSGNIVLTSGRDNLHNLFDIRSLEVCGTLRANGNRVASNWSRSC 453
S+ + I +S GN VL D+ L D + E+ + G+ S + C
Sbjct: 180 SDNLGQ--PVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYK--GHISKSFKTDCC 235
Query: 454 LSADDNYVASGSSDGSVCVWSRSLANIVSTLKEDASPILSCAWSGLGKPLASANKNGTVY 513
L+ D +V GS DG V W A ++S + + S ++ + +++ +GT+
Sbjct: 236 LTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIR 295
Query: 514 IW 515
+W
Sbjct: 296 VW 297
>AT2G43770.1 | Transducin/WD40 repeat-like superfamily protein |
Chr2:18134272-18135303 REVERSE LENGTH=343 | 201606
Length = 343
Score = 101 bits (251), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 127/293 (43%), Gaps = 11/293 (3%)
Query: 230 AHEGGCGSILFQYHSDKLITGGQDRTVKLW----DTKTGLLSRTLHGSLGSILDLSVTHD 285
H ++ F + +G DR + LW D K ++ L G +ILDL T D
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMV---LKGHKNAILDLHWTSD 107
Query: 286 NRYIIAASSSNNLYVWDLGTGRIRHTLTGHTDKVCAVDVSKVSSSHVVSAAYDRTIKVWD 345
I++AS + WD+ TG+ + H+ V + ++ ++S + D T K+WD
Sbjct: 108 GSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWD 167
Query: 346 LQRGYCVNTMISHSNCNSVCFSTDGLTICSGHVDGNLRLWDIKSGRLISEVAAHSNAITS 405
+++ + T +V FS I +G VD ++++WD++ G + H + IT
Sbjct: 168 MRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITG 227
Query: 406 ICLSRSGNIVLTSGRDNLHNLFDIRSL----EVCGTLRANGNRVASNWSRSCLSADDNYV 461
+ LS G+ +LT+G DN ++D+R + + N + S D V
Sbjct: 228 MSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKV 287
Query: 462 ASGSSDGSVCVWSRSLANIVSTLKEDASPILSCAWSGLGKPLASANKNGTVYI 514
+GSSD V +W + + L + C + + S + + +Y+
Sbjct: 288 TAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYL 340
Score = 82.4 bits (202), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 19/258 (7%)
Query: 270 LHGSLGSILDLSVTHDNRYIIAASSSNNLYVWDL-GTGRIRHTLTGHTDKVCAVDVSKVS 328
L G ++ + I + S +++W + G + L GH + + +D+ S
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAI--LDLHWTS 106
Query: 329 -SSHVVSAAYDRTIKVWDLQRGYCVNTMISHSN-CNSVCFSTDGLT-ICSGHVDGNLRLW 385
S +VSA+ D+T++ WD++ G + M HS+ NS C + G I SG DG +LW
Sbjct: 107 DGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLW 166
Query: 386 DIKSGRLISEVAAHSNAITSICLSRSGNIVLTSGRDNLHNLFDIRSLEVCGTLRANGNRV 445
D++ R + IT++ S + + + T G DN ++D+R E TL + + +
Sbjct: 167 DMRQ-RGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTI 225
Query: 446 ASNWSRSCLSADDNYVASGSSDGSVCVWS-RSLANIVSTLK-------EDASPILSCAWS 497
LS D +Y+ + D +CVW R A +K +L C+WS
Sbjct: 226 TG----MSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWS 281
Query: 498 GLGKPLASANKNGTVYIW 515
G + + + + V+IW
Sbjct: 282 PDGTKVTAGSSDRMVHIW 299
>AT5G13480.2 | Transducin/WD40 repeat-like superfamily protein |
Chr5:4326638-4331521 REVERSE LENGTH=657 | 201606
Length = 657
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 127/287 (44%), Gaps = 20/287 (6%)
Query: 238 ILFQYHSDKLITGGQDRTVKLWDTKTGLLSRTLHGSLGSILDLSVTHDNRYIIAASSSNN 297
+L+ +LITG Q LW+ ++ L I + +H+ Y+++
Sbjct: 140 VLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGT 199
Query: 298 LYVWDLGTGRIRHTLTGHTDKV-----CAVDVSKVSSSHVVSAAYDRTIKVWDLQRGYCV 352
L W ++ T H + + C D+ S + D T+KVWD + CV
Sbjct: 200 LKYWQNNMNNVKANKTAHKESIRDLSFCKTDLK------FCSCSDDTTVKVWDFTK--CV 251
Query: 353 N--TMISHS-NCNSVCFSTDGLTICSGHVDGNLRLWDIKSGRLISEVAAHSNAITSICLS 409
+ ++ H + SV + + SG D ++LWD +SGR + + H N + S+ +
Sbjct: 252 DESSLTGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWN 311
Query: 410 RSGNIVLTSGRDNLHNLFDIRSLEVCGTLRANGNRVASNWSRSCLSADDNYVASGSSDGS 469
++GN +LT+ +D + L+DIR+++ + R + V S C + Y SGSSDGS
Sbjct: 312 QNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPC---HEEYFVSGSSDGS 368
Query: 470 VCVWSRSLANI-VSTLKEDASPILSCAWSGLGKPLASANKNGTVYIW 515
+C W N + + + AW +G L S + + T W
Sbjct: 369 ICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 415