BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2140.1
(104 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 49 6e-08
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 49 6e-08
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 49.3 bits (116), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 6 AAKDAIWMSGLVRDLGLK-QQMAEVYCDNQSAIHLTKNQMYHERTKHIDFRYHFIKD 61
A + +W++ R+L L + ++CDN +AIH+ N ++HERTKHI+ H +++
Sbjct: 497 ATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 49.3 bits (116), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 6 AAKDAIWMSGLVRDLGLK-QQMAEVYCDNQSAIHLTKNQMYHERTKHIDFRYHFIKD 61
A + +W++ R+L L + ++CDN +AIH+ N ++HERTKHI+ H +++
Sbjct: 497 ATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553