BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2180.1
(192 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 126 1e-33
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 126 1e-33
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 59 1e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 126 bits (317), Expect = 1e-33, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 115/190 (60%), Gaps = 7/190 (3%)
Query: 4 FSPVVKHSSIRLLLAMVALYDMELEQLDVKIAFLHGELEEQIYMRQPEGFEILGKE---- 59
FSPV K +S++L+LA+ A+Y+ L QLD+ AFL+G+L+E+IYM+ P G+ +
Sbjct: 167 FSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPP 226
Query: 60 DEVCLLKKPLYGLEQSPRQWYKRLDTFMVKNSYDRSRYDSCVYHRKLSDGSYVYLLLYVD 119
+ VC LKK +YGL+Q+ RQW+ + ++ + +S D Y K++ ++ +L+YVD
Sbjct: 227 NAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVD 285
Query: 120 DMLIACKDMSEIHVLKDQLKGEFETKDLGASRKILGMEIRRNRCAGKLFLSQKMYIEKVL 179
D++I + + + LK QLK F+ +DLG + LG+EI R+ A + + Q+ Y +L
Sbjct: 286 DIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARS--AAGINICQRKYALDLL 343
Query: 180 ERFVMTEAKP 189
+ + KP
Sbjct: 344 DETGLLGCKP 353
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 126 bits (317), Expect = 1e-33, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 115/190 (60%), Gaps = 7/190 (3%)
Query: 4 FSPVVKHSSIRLLLAMVALYDMELEQLDVKIAFLHGELEEQIYMRQPEGFEILGKE---- 59
FSPV K +S++L+LA+ A+Y+ L QLD+ AFL+G+L+E+IYM+ P G+ +
Sbjct: 167 FSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPP 226
Query: 60 DEVCLLKKPLYGLEQSPRQWYKRLDTFMVKNSYDRSRYDSCVYHRKLSDGSYVYLLLYVD 119
+ VC LKK +YGL+Q+ RQW+ + ++ + +S D Y K++ ++ +L+YVD
Sbjct: 227 NAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVD 285
Query: 120 DMLIACKDMSEIHVLKDQLKGEFETKDLGASRKILGMEIRRNRCAGKLFLSQKMYIEKVL 179
D++I + + + LK QLK F+ +DLG + LG+EI R+ A + + Q+ Y +L
Sbjct: 286 DIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARS--AAGINICQRKYALDLL 343
Query: 180 ERFVMTEAKP 189
+ + KP
Sbjct: 344 DETGLLGCKP 353
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 58.9 bits (141), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 112 VYLLLYVDDMLIACKDMSEIHVLKDQLKGEFETKDLGASRKILGMEIRRNRCAGKLFLSQ 171
+YLLLYVDD+L+ + +++L QL F KDLG LG++I+ + LFLSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTH--PSGLFLSQ 58
Query: 172 KMYIEKVLERFVMTEAKPVGT 192
Y E++L M + KP+ T
Sbjct: 59 TKYAEQILNNAGMLDCKPMST 79