BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2330.1
(405 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G51172.1 | hypothetical protein | Chr1:18963205-18965571 FORW... 55 6e-08
>AT1G51172.1 | hypothetical protein | Chr1:18963205-18965571 FORWARD
LENGTH=681 | 201606
Length = 681
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 79 GWTTLYTTPFS-MGFRFPIPRLVHGVLDHYEIAPWQLMPGAWRLLLCLEVLAYLQSVDLS 137
G T + FS G FP+P ++ ++ + IA QL P R +LCL LA L+
Sbjct: 60 GHTCAFEIFFSECGLFFPLPDILIDLMHEFGIALPQLCPNVIRTVLCLLTLAEEDGFRLA 119
Query: 138 ASDVLRFYHLASHSRDKGRYRIKPRKPGVLLITGLSDTDRKWKTNYFL 185
SD L+ Y + SR + + PRK G + + D W+ +YF
Sbjct: 120 LSDFLQLYAV-KKSRTNNTFFLSPRK-GFRVFEDFPEKDEHWRKSYFF 165