BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2400.1
(180 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G13170.1 | OSBP(oxysterol binding protein)-related protein 1D... 156 3e-44
AT1G13170.2 | OSBP(oxysterol binding protein)-related protein 1D... 155 4e-44
AT4G08180.3 | OSBP(oxysterol binding protein)-related protein 1C... 111 1e-28
AT4G08180.2 | OSBP(oxysterol binding protein)-related protein 1C... 111 1e-28
AT4G08180.4 | OSBP(oxysterol binding protein)-related protein 1C... 111 1e-28
>AT1G13170.1 | OSBP(oxysterol binding protein)-related protein 1D |
Chr1:4488826-4492278 REVERSE LENGTH=816 | 201606
Length = 816
Score = 156 bits (394), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 118/190 (62%), Gaps = 15/190 (7%)
Query: 1 MNPLCCIVPVSIDQDCSSNPTVVVRSSSQSPLGFDN-SVRNGSNKQTFSAQVSSVGTDYD 59
MNPLCCI PVSID +NP VV SS LG + V ++K +FS Q S + D
Sbjct: 1 MNPLCCIAPVSIDD--RTNP--VVAKSSNHHLGLEAIPVSKHASKPSFSTQASWISQDQL 56
Query: 60 FALSGPSDHDQIPPSLSDEVRNSNCG---FSNGVVSGS-VAGILYKWVNYGKRWKSRWFM 115
LS D + D +SN G F N V +G+ VAGI+YKWVNYGK W++RWF
Sbjct: 57 ERLSSEV-VDDVNLDGKDASSSSNKGCFFFGNCVGAGAGVAGIMYKWVNYGKGWRARWFE 115
Query: 116 LEDGVLSYYKIHGPDKISVNAVRDNGVKVIGEESIRYIRKG-----NKTTNGAFRSTKQW 170
LEDGVLSYYKIHGPDKI +N R+ GV+VIGEES+RYIRK N+ A +++
Sbjct: 116 LEDGVLSYYKIHGPDKIVMNPSREKGVRVIGEESVRYIRKASCGSSNRLGASAVAASRPC 175
Query: 171 KPSGEIHLKV 180
KP GEIHLKV
Sbjct: 176 KPFGEIHLKV 185
>AT1G13170.2 | OSBP(oxysterol binding protein)-related protein 1D |
Chr1:4488826-4492278 REVERSE LENGTH=837 | 201606
Length = 837
Score = 155 bits (393), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 118/190 (62%), Gaps = 15/190 (7%)
Query: 1 MNPLCCIVPVSIDQDCSSNPTVVVRSSSQSPLGFDN-SVRNGSNKQTFSAQVSSVGTDYD 59
MNPLCCI PVSID +NP VV SS LG + V ++K +FS Q S + D
Sbjct: 1 MNPLCCIAPVSIDD--RTNP--VVAKSSNHHLGLEAIPVSKHASKPSFSTQASWISQDQL 56
Query: 60 FALSGPSDHDQIPPSLSDEVRNSNCG---FSNGVVSGS-VAGILYKWVNYGKRWKSRWFM 115
LS D + D +SN G F N V +G+ VAGI+YKWVNYGK W++RWF
Sbjct: 57 ERLSSEV-VDDVNLDGKDASSSSNKGCFFFGNCVGAGAGVAGIMYKWVNYGKGWRARWFE 115
Query: 116 LEDGVLSYYKIHGPDKISVNAVRDNGVKVIGEESIRYIRKG-----NKTTNGAFRSTKQW 170
LEDGVLSYYKIHGPDKI +N R+ GV+VIGEES+RYIRK N+ A +++
Sbjct: 116 LEDGVLSYYKIHGPDKIVMNPSREKGVRVIGEESVRYIRKASCGSSNRLGASAVAASRPC 175
Query: 171 KPSGEIHLKV 180
KP GEIHLKV
Sbjct: 176 KPFGEIHLKV 185
>AT4G08180.3 | OSBP(oxysterol binding protein)-related protein 1C |
Chr4:5169727-5173360 FORWARD LENGTH=813 | 201606
Length = 813
Score = 111 bits (278), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 66/93 (70%)
Query: 88 NGVVSGSVAGILYKWVNYGKRWKSRWFMLEDGVLSYYKIHGPDKISVNAVRDNGVKVIGE 147
N +V +AGILYKWVNYG+ W+ RWF+L+DGVLSYYKIHGPDKI V+ + G KVIG+
Sbjct: 99 NDIVGNGIAGILYKWVNYGRGWRPRWFVLQDGVLSYYKIHGPDKIFVSPETEKGSKVIGD 158
Query: 148 ESIRYIRKGNKTTNGAFRSTKQWKPSGEIHLKV 180
ES R I + N+ + + KP GE+HLKV
Sbjct: 159 ESARMISRHNRRGGSSSSCQLRRKPFGEVHLKV 191
>AT4G08180.2 | OSBP(oxysterol binding protein)-related protein 1C |
Chr4:5169727-5173360 FORWARD LENGTH=813 | 201606
Length = 813
Score = 111 bits (278), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 66/93 (70%)
Query: 88 NGVVSGSVAGILYKWVNYGKRWKSRWFMLEDGVLSYYKIHGPDKISVNAVRDNGVKVIGE 147
N +V +AGILYKWVNYG+ W+ RWF+L+DGVLSYYKIHGPDKI V+ + G KVIG+
Sbjct: 99 NDIVGNGIAGILYKWVNYGRGWRPRWFVLQDGVLSYYKIHGPDKIFVSPETEKGSKVIGD 158
Query: 148 ESIRYIRKGNKTTNGAFRSTKQWKPSGEIHLKV 180
ES R I + N+ + + KP GE+HLKV
Sbjct: 159 ESARMISRHNRRGGSSSSCQLRRKPFGEVHLKV 191
>AT4G08180.4 | OSBP(oxysterol binding protein)-related protein 1C |
Chr4:5169727-5173360 FORWARD LENGTH=814 | 201606
Length = 814
Score = 111 bits (278), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 66/93 (70%)
Query: 88 NGVVSGSVAGILYKWVNYGKRWKSRWFMLEDGVLSYYKIHGPDKISVNAVRDNGVKVIGE 147
N +V +AGILYKWVNYG+ W+ RWF+L+DGVLSYYKIHGPDKI V+ + G KVIG+
Sbjct: 99 NDIVGNGIAGILYKWVNYGRGWRPRWFVLQDGVLSYYKIHGPDKIFVSPETEKGSKVIGD 158
Query: 148 ESIRYIRKGNKTTNGAFRSTKQWKPSGEIHLKV 180
ES R I + N+ + + KP GE+HLKV
Sbjct: 159 ESARMISRHNRRGGSSSSCQLRRKPFGEVHLKV 191