BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2530.1
(252 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 52 2e-07
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 28/191 (14%)
Query: 27 RLDRALVNETWLQSLSNSSLIHLDTSGSDHNPIFLNTTNIGKPKPKPFKFIRTWMSHPDC 86
+LDRA+ N W S ++ + + SDH+P + N+ K K F++ +HP
Sbjct: 285 KLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLSTHPTF 344
Query: 87 HDFIANKWNSNNLHSPHHLQVNLANLGKHLSK-------WNKEVFGNLGVLIQNTIAVL- 138
+ W H + +LG+HL N++ FGN+ + + L
Sbjct: 345 LVSLTVAWEEQIPVGSH-----MFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLE 399
Query: 139 ----QTNINRNDCLMHKTRLEKLYRQQ--------ESLWKEKVRNNFMTLRDKNTKYFHS 186
Q N +D L R+E + R++ ES +++K R ++ D NT++FH
Sbjct: 400 SIQSQLLTNPSDSLF---RVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHK 456
Query: 187 QAIQRNRNNRI 197
+ N I
Sbjct: 457 VILANQAKNLI 467