BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2570.1
(194 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G28160.2 | FER-like regulator of iron uptake | Chr2:12004713-... 69 8e-14
AT2G28160.1 | FER-like regulator of iron uptake | Chr2:12004713-... 69 1e-13
>AT2G28160.2 | FER-like regulator of iron uptake |
Chr2:12004713-12006003 FORWARD LENGTH=311 | 201606
Length = 311
Score = 68.9 bits (167), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 85/170 (50%), Gaps = 32/170 (18%)
Query: 16 HLNGYDLQDFIIDTNFEQFIDLITND-------PVDIF-------TPFHQDEILFGGDNG 61
++N +L +F++D NF+QFI+LI D PV F +P DE F
Sbjct: 10 NINDLELHNFLVDPNFDQFINLIRGDHQTIDENPVLDFDLGPLQNSPCFIDENQFI-PTP 68
Query: 62 CDQFFASTPEEATLGFNSTSNPYDSNLIAHHDYVLPFSVNYL--EEMEETNDEDYSGTMT 119
D F P+ DSN+ SV E+ E+ ND D S T
Sbjct: 69 VDDLFDELPD------------LDSNVAESFRSFDGDSVRAGGEEDEEDYNDGDDSSATT 116
Query: 120 STNLMSKKRSGTSDDSRSIITSERRRRVRMKEKLYALRALVPNITKVKQC 169
+ N ++K +D SR++I SERRRR RMK+KLYALR+LVPNITK+ +
Sbjct: 117 TNNDGTRKTK--TDRSRTLI-SERRRRGRMKDKLYALRSLVPNITKMDKA 163
>AT2G28160.1 | FER-like regulator of iron uptake |
Chr2:12004713-12005908 FORWARD LENGTH=318 | 201606
Length = 318
Score = 68.6 bits (166), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 85/170 (50%), Gaps = 32/170 (18%)
Query: 16 HLNGYDLQDFIIDTNFEQFIDLITND-------PVDIF-------TPFHQDEILFGGDNG 61
++N +L +F++D NF+QFI+LI D PV F +P DE F
Sbjct: 10 NINDLELHNFLVDPNFDQFINLIRGDHQTIDENPVLDFDLGPLQNSPCFIDENQFI-PTP 68
Query: 62 CDQFFASTPEEATLGFNSTSNPYDSNLIAHHDYVLPFSVNYL--EEMEETNDEDYSGTMT 119
D F P+ DSN+ SV E+ E+ ND D S T
Sbjct: 69 VDDLFDELPD------------LDSNVAESFRSFDGDSVRAGGEEDEEDYNDGDDSSATT 116
Query: 120 STNLMSKKRSGTSDDSRSIITSERRRRVRMKEKLYALRALVPNITKVKQC 169
+ N ++K +D SR++I SERRRR RMK+KLYALR+LVPNITK+ +
Sbjct: 117 TNNDGTRKTK--TDRSRTLI-SERRRRGRMKDKLYALRSLVPNITKMDKA 163