BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2610.1
(1323 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 310 3e-88
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 310 3e-88
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 121 2e-30
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 92 5e-21
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 74 2e-15
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 310 bits (795), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/480 (36%), Positives = 272/480 (56%), Gaps = 19/480 (3%)
Query: 794 VMVTDSGEPQCYEEAIDDEHKKEWLKAMQDEIESLHKNNTFKLVEKPKNKKILKNKWVFK 853
V + + EP Y EA + W AM DEI ++ +T+++ P NKK + KWV+K
Sbjct: 78 VCIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 854 IKTEERNSQPRYKARLVVKGFGQKKGIDFDEIFSPVVKMSSIRLVLGLAASMNLEIEQLD 913
IK + RYKARLV KG+ Q++GIDF E FSPV K++S++L+L ++A N + QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 914 VKTAFLHGDLEEDVYMEQPTGFEVKGKEHL----VCKLEKSLYGLKQAPRQWYKKFESFM 969
+ AFL+GDL+E++YM+ P G+ + + L VC L+KS+YGLKQA RQW+ KF +
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 970 KDQGYHRTTSDHCVFVHKFLDGDLIILLLYVDDMLIVGQDANKISRLKKELNKYFDMKDL 1029
G+ ++ SDH F+ K + +L+YVDD++I + + LK +L F ++DL
Sbjct: 255 IGFGFVQSHSDHTYFL-KITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDL 313
Query: 1030 GPAKQILGMHISRDRKAGKLWLSQERYIEKVLERFNMDKTKPVSCPLASHFKLTRDQCPS 1089
GP K LG+ I+R A + + Q +Y +L+ + KP S P+ S
Sbjct: 314 GPLKYFLGLEIARS--AAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTF------S 365
Query: 1090 TRSEKEEMEKIPYALAVGSLMYAMVCTRPDIAFAVGVVSRFLANPGKEHWLAVKWILKYL 1149
S + ++ Y +G LMY + TR DI+FAV +S+F P H AV IL Y+
Sbjct: 366 AHSGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYI 424
Query: 1150 RGTSKARICFGNDKPV-LVGYTDADMAGDVDSKRSTSSYLLTLSGGAVSWQSKLQKCVAL 1208
+GT + + + + L ++DA D++RST+ Y + L +SW+SK Q+ V+
Sbjct: 425 KGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSK 484
Query: 1209 STKEAEYIAITECCKEMLWMKRLLEELGMKQDN-YVIHCDSQSVIHLSKNSSFHSKSKHI 1267
S+ EAEY A++ EM+W+ + EL + ++ CD+ + IH++ N+ FH ++KHI
Sbjct: 485 SSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHI 544
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 310 bits (795), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/480 (36%), Positives = 272/480 (56%), Gaps = 19/480 (3%)
Query: 794 VMVTDSGEPQCYEEAIDDEHKKEWLKAMQDEIESLHKNNTFKLVEKPKNKKILKNKWVFK 853
V + + EP Y EA + W AM DEI ++ +T+++ P NKK + KWV+K
Sbjct: 78 VCIAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 854 IKTEERNSQPRYKARLVVKGFGQKKGIDFDEIFSPVVKMSSIRLVLGLAASMNLEIEQLD 913
IK + RYKARLV KG+ Q++GIDF E FSPV K++S++L+L ++A N + QLD
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLD 194
Query: 914 VKTAFLHGDLEEDVYMEQPTGFEVKGKEHL----VCKLEKSLYGLKQAPRQWYKKFESFM 969
+ AFL+GDL+E++YM+ P G+ + + L VC L+KS+YGLKQA RQW+ KF +
Sbjct: 195 ISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTL 254
Query: 970 KDQGYHRTTSDHCVFVHKFLDGDLIILLLYVDDMLIVGQDANKISRLKKELNKYFDMKDL 1029
G+ ++ SDH F+ K + +L+YVDD++I + + LK +L F ++DL
Sbjct: 255 IGFGFVQSHSDHTYFL-KITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDL 313
Query: 1030 GPAKQILGMHISRDRKAGKLWLSQERYIEKVLERFNMDKTKPVSCPLASHFKLTRDQCPS 1089
GP K LG+ I+R A + + Q +Y +L+ + KP S P+ S
Sbjct: 314 GPLKYFLGLEIARS--AAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTF------S 365
Query: 1090 TRSEKEEMEKIPYALAVGSLMYAMVCTRPDIAFAVGVVSRFLANPGKEHWLAVKWILKYL 1149
S + ++ Y +G LMY + TR DI+FAV +S+F P H AV IL Y+
Sbjct: 366 AHSGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYI 424
Query: 1150 RGTSKARICFGNDKPV-LVGYTDADMAGDVDSKRSTSSYLLTLSGGAVSWQSKLQKCVAL 1208
+GT + + + + L ++DA D++RST+ Y + L +SW+SK Q+ V+
Sbjct: 425 KGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSK 484
Query: 1209 STKEAEYIAITECCKEMLWMKRLLEELGMKQDN-YVIHCDSQSVIHLSKNSSFHSKSKHI 1267
S+ EAEY A++ EM+W+ + EL + ++ CD+ + IH++ N+ FH ++KHI
Sbjct: 485 SSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHI 544
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 121 bits (303), Expect = 2e-30, Method: Composition-based stats.
Identities = 78/233 (33%), Positives = 121/233 (51%), Gaps = 11/233 (4%)
Query: 996 LLLYVDDMLIVGQDANKISRLKKELNKYFDMKDLGPAKQILGMHISRDRKAGKLWLSQER 1055
LLLYVDD+L+ G ++ L +L+ F MKDLGP LG+ I + +G L+LSQ +
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI-KTHPSG-LFLSQTK 60
Query: 1056 YIEKVLERFNMDKTKPVSCPLASHFKLTRDQCPSTRSEKEEMEKIPYALAVGSLMYAMVC 1115
Y E++L M KP+S PL KL + + + I VG+L Y +
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSI-----VGALQY-LTL 112
Query: 1116 TRPDIAFAVGVVSRFLANPGKEHWLAVKWILKYLRGTS-KARICFGNDKPVLVGYTDADM 1174
TRPDI++AV +V + + P + +K +L+Y++GT N K + + D+D
Sbjct: 113 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDW 172
Query: 1175 AGDVDSKRSTSSYLLTLSGGAVSWQSKLQKCVALSTKEAEYIAITECCKEMLW 1227
AG ++RST+ + L +SW +K Q V+ S+ E EY A+ E+ W
Sbjct: 173 AGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 92.0 bits (227), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 79/135 (58%), Gaps = 7/135 (5%)
Query: 779 TRERAPSTKYPPHEYVMVTDS--GEPQCYEEAIDDEHKKEWLKAMQDEIESLHKNNTFKL 836
TR +A K P + +T + EP+ A+ D W +AMQ+E+++L +N T+ L
Sbjct: 3 TRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPG---WCQAMQEELDALSRNKTWIL 59
Query: 837 VEKPKNKKILKNKWVFKIKTEERNSQPRYKARLVVKGFGQKKGIDFDEIFSPVVKMSSIR 896
V P N+ IL KWVFK K + R KARLV KGF Q++GI F E +SPVV+ ++IR
Sbjct: 60 VPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIR 119
Query: 897 LVLGLAASMNLEIEQ 911
+L +A LE+ Q
Sbjct: 120 TILNVAQ--QLEVGQ 132
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 74.3 bits (181), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 584 MNRTIVERIRCMLSEAKLPKSFWGEAMRTACYLINLSPSAPLDGDVAERVWAGKEVSYEH 643
MNRTI+E++R ML E LPK+F +A TA ++IN PS ++ V + VW +Y +
Sbjct: 1 MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60
Query: 644 LRVFGCKAFVHIPKDQRAKLDDKAKQ 669
LR FGC A++H KL +AK+
Sbjct: 61 LRRFGCVAYIHC---DEGKLKPRAKK 83