BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2700.1
(298 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 113 1e-27
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 113 1e-27
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 91 3e-21
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 50 7e-08
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 113 bits (282), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 142/312 (45%), Gaps = 58/312 (18%)
Query: 1 MKVPEGFKLLKGN---PCTMYSLKLNRAFYGLKQSGRMWYNRLSEYLIKEG--------- 48
MK+P G+ +G+ P + LK ++ YGLKQ+ R W+ + S LI G
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLK--KSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHT 267
Query: 49 -------------------------TPEEISKVAEYMKKEFEMKDLRKTKFCLGLQIERS 83
+ ++ +K F+++DL K+ LGL+I RS
Sbjct: 268 YFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARS 327
Query: 84 SSGILVHPTLYTEKVLKRFNMENSYPLSTPM---VVRSLDALKDPFRPKEEKETLLGLEV 140
++GI + Y +L + P S PM V S + D K
Sbjct: 328 AAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA---------- 377
Query: 141 PYLSVVGALSYLAQCTRLDIAFALNLLARYCSAPTKRHWVGVKQILRYLRGTTDLGLFYS 200
Y ++G L YL Q TRLDI+FA+N L+++ AP H V +IL Y++GT GLFYS
Sbjct: 378 -YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYS 435
Query: 201 KNLSGDSQVKGYTDAGYISDPHKGISQTG-CVFTSGGTTFSWRSSKQTMPATSSNHVEII 259
+ Q++ ++DA + S S G C+F G + SW+S KQ + + SS E
Sbjct: 436 SQ--AEMQLQVFSDASFQSCKDTRRSTNGYCMFL-GTSLISWKSKKQQVVSKSSAEAEYR 492
Query: 260 ALHEATRECVWL 271
AL AT E +WL
Sbjct: 493 ALSFATDEMMWL 504
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 113 bits (282), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 142/312 (45%), Gaps = 58/312 (18%)
Query: 1 MKVPEGFKLLKGN---PCTMYSLKLNRAFYGLKQSGRMWYNRLSEYLIKEG--------- 48
MK+P G+ +G+ P + LK ++ YGLKQ+ R W+ + S LI G
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLK--KSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHT 267
Query: 49 -------------------------TPEEISKVAEYMKKEFEMKDLRKTKFCLGLQIERS 83
+ ++ +K F+++DL K+ LGL+I RS
Sbjct: 268 YFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARS 327
Query: 84 SSGILVHPTLYTEKVLKRFNMENSYPLSTPM---VVRSLDALKDPFRPKEEKETLLGLEV 140
++GI + Y +L + P S PM V S + D K
Sbjct: 328 AAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA---------- 377
Query: 141 PYLSVVGALSYLAQCTRLDIAFALNLLARYCSAPTKRHWVGVKQILRYLRGTTDLGLFYS 200
Y ++G L YL Q TRLDI+FA+N L+++ AP H V +IL Y++GT GLFYS
Sbjct: 378 -YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYS 435
Query: 201 KNLSGDSQVKGYTDAGYISDPHKGISQTG-CVFTSGGTTFSWRSSKQTMPATSSNHVEII 259
+ Q++ ++DA + S S G C+F G + SW+S KQ + + SS E
Sbjct: 436 SQ--AEMQLQVFSDASFQSCKDTRRSTNGYCMFL-GTSLISWKSKKQQVVSKSSAEAEYR 492
Query: 260 ALHEATRECVWL 271
AL AT E +WL
Sbjct: 493 ALSFATDEMMWL 504
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 90.9 bits (224), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 14/212 (6%)
Query: 60 MKKEFEMKDLRKTKFCLGLQIERSSSGILVHPTLYTEKVLKRFNMENSYPLSTPMVVRSL 119
+ F MKDL + LG+QI+ SG+ + T Y E++L M + P+STP+ ++
Sbjct: 27 LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN 86
Query: 120 DALKDPFRPKEEKETLLGLEVPYLSVVGALSYLAQCTRLDIAFALNLLARYCSAPTKRHW 179
++ P + S+VGAL YL TR DI++A+N++ + PT +
Sbjct: 87 SSVSTAKYPDPSD---------FRSIVGALQYLT-LTRPDISYAVNIVCQRMHEPTLADF 136
Query: 180 VGVKQILRYLRGTTDLGLFYSKNLSGDSQVKGYTDAGYISDPHKGISQTG-CVFTSGGTT 238
+K++LRY++GT GL+ KN V+ + D+ + S TG C F G
Sbjct: 137 DLLKRVLRYVKGTIFHGLYIHKN--SKLNVQAFCDSDWAGCTSTRRSTTGFCTFL-GCNI 193
Query: 239 FSWRSSKQTMPATSSNHVEIIALHEATRECVW 270
SW + +Q + SS E AL E W
Sbjct: 194 ISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 50.4 bits (119), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 156 TRLDIAFALNLLARYCSAPTKRHWVGVKQILRYLRGTTDLGLFYSKNLSGDSQVKGYTDA 215
TR D+ FA+N L+++ SA V ++L Y++GT GLFYS + D Q+K + D+
Sbjct: 6 TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSA--TSDLQLKAFADS 63
Query: 216 GYISDPHKGISQTG 229
+ S P S TG
Sbjct: 64 DWASCPDTRRSVTG 77