BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2780.1
(385 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 66 2e-11
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 54 2e-07
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 34/225 (15%)
Query: 174 NIISNLEMTDMGFQGNPYTWSNKQFGHNLIQERLDRALANQPWLQKYNNS-GITHLEGIG 232
N + + ++ D+ +G YTWSN Q N I +LDRA+AN W + ++ + L G+
Sbjct: 254 NCLRDSDLVDIPSRGVHYTWSNHQ-DDNPIIRKLDRAIANGDWFSSFPSAIAVFELSGV- 311
Query: 233 SDHLP--ILLSSFEPHNKLPKPFKFIRTWMSHLDCQGFITDKWYSKIFPQTDIQANLTHL 290
SDH P I+L + +K K F++ +H +T W +I + +++ L
Sbjct: 312 SDHSPCIIILENLPKRSK--KCFRYFSFLSTHPTFLVSLTVAWEEQI----PVGSHMFSL 365
Query: 291 SKHLSQ-------WNKQVFGNIENQINHIVASL-----QLCSGHNEYIGLSKRLEELYKL 338
+HL N+Q FGNI+++ + SL QL + ++ + R+E + +
Sbjct: 366 GEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLF---RVEHVARK 422
Query: 339 Q--------ESMWKEKSRNNFVTLGDKNTKYFHSQAIHRNRNNRI 375
+ ES +++KSR ++ GD NT++FH + N I
Sbjct: 423 KWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLI 467
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 19/231 (8%)
Query: 136 NPGPDMPWMIIGDLNIILDPQDKSG---GNVNSNSFTPKVNNIISNLEMTDMGFQGNPYT 192
+P + PW+++GD N I + N++ + + + ++ D+ +G YT
Sbjct: 115 SPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLE-DLQACMRDSDLVDLPCRGVLYT 173
Query: 193 WSNKQFGHNLIQERLDRALANQPWLQKYNNSGITHLEGIGSDHLP--ILLSSFEPHNKLP 250
WSN Q N I +LDRA+ N WL + + SDH ++L++ P +K
Sbjct: 174 WSNHQ-QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMVILNNSPPLSK-K 231
Query: 251 KPFKFIRTWMSHLDCQGFITDKWYSKIFPQTDIQANLTHLSKHLSQWNKQVFGNIENQIN 310
K FK+ +H D I W +I + + + L + L + K G +
Sbjct: 232 KSFKYFSFLSTHPDFISSILAAWQKEI----AVGSFMFSLGELLKEAKKACRGLNRRGFS 287
Query: 311 HIVASLQLCSGHNEYIGLSKRLEE-----LYKLQESMWKEKSRNNFVTLGD 356
+I A QL S ++++ ++ + ES +K+KSR ++ GD
Sbjct: 288 NIQA--QLMSNPSDFLFRAEHVARKNWNFFAAALESFYKQKSRIKWLKEGD 336