BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2810.1
(163 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G11110.1 | RING/U-box superfamily protein | Chr3:3479979-3480... 113 3e-32
AT1G23980.1 | RING/U-box superfamily protein | Chr1:8484879-8485... 87 2e-20
AT3G10910.1 | RING/U-box superfamily protein | Chr3:3413068-3413... 82 7e-20
AT1G35330.1 | RING/U-box superfamily protein | Chr1:12965043-129... 83 4e-19
AT4G40070.1 | RING/U-box superfamily protein | Chr4:18576533-185... 82 5e-19
>AT3G11110.1 | RING/U-box superfamily protein | Chr3:3479979-3480455
FORWARD LENGTH=158 | 201606
Length = 158
Score = 113 bits (282), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 93/152 (61%), Gaps = 9/152 (5%)
Query: 7 FHWHYADLDDKNFQVHGRSLLFIIIILALLLLFSLLCARWLYRYRHHLSSSSSTTPISIT 66
+WH DD+NFQ+HGR+L F + + +++L F+LL LY +R+ L S I++
Sbjct: 14 LYWHENQYDDRNFQIHGRTLFFALALFSVVLFFALLT---LYIHRNCLPRDS----INLH 66
Query: 67 TTPHQDETRHGRQVGLDLATINSFPIILHYSTHSYSEETQCS-ICLSILQDEEKVKVLPF 125
+ TR R GLD A I S P++L + EE + ICL ++ EK+KVLP
Sbjct: 67 ASSPDRLTR-CRSGGLDPAEIRSLPVVLCRRERAEEEEEKECCICLGGFEEGEKMKVLPP 125
Query: 126 CKHSYHPECVDQWLTTQSSCPLCRASLQVNSS 157
C H YH ECVD+WL T+SSCPLCR S++V+SS
Sbjct: 126 CSHCYHCECVDRWLKTESSCPLCRVSIRVDSS 157
>AT1G23980.1 | RING/U-box superfamily protein | Chr1:8484879-8485988
REVERSE LENGTH=369 | 201606
Length = 369
Score = 86.7 bits (213), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 79/137 (57%), Gaps = 10/137 (7%)
Query: 26 LLFIIIILALLL----LFSLLCARWLYRYRHHLSSS---SSTTPISITTTPHQDETR--- 75
+LFII++L+++ + LL +L + R +LSSS S+ P + +Q + +
Sbjct: 53 ILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLF 112
Query: 76 HGRQVGLDLATINSFPIILHYSTHSYSEETQCSICLSILQDEEKVKVLPFCKHSYHPECV 135
H GLD A I++ P+ L+ E C++CL +++K+++LP C H++H +C+
Sbjct: 113 HLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCI 172
Query: 136 DQWLTTQSSCPLCRASL 152
D WL + S+CPLCR +L
Sbjct: 173 DTWLLSNSTCPLCRGTL 189
>AT3G10910.1 | RING/U-box superfamily protein | Chr3:3413068-3413613
REVERSE LENGTH=181 | 201606
Length = 181
Score = 82.0 bits (201), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 11/142 (7%)
Query: 29 IIIILALLLLFSLLCA-------RWLYRYRHHLSSSSSTTPISITTTPHQDETRHGRQVG 81
++IILA LL +L+CA R + R +S +S + + + R G
Sbjct: 33 MVIILAALLC-ALICALSLNSALRCVLRITRRFTSDDQ---VSNASNANANLGRLAAATG 88
Query: 82 LDLATINSFPIILHYSTHSYSEETQCSICLSILQDEEKVKVLPFCKHSYHPECVDQWLTT 141
L + P+ L+ S + T+C ICL +D EKV+VLP C H +H C+D WL +
Sbjct: 89 LKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLS 148
Query: 142 QSSCPLCRASLQVNSSMPDSTS 163
+SSCP CR SL + P + S
Sbjct: 149 RSSCPTCRQSLLLEQPSPMAVS 170
>AT1G35330.1 | RING/U-box superfamily protein |
Chr1:12965043-12966113 FORWARD LENGTH=328 | 201606
Length = 328
Score = 82.8 bits (203), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 19/134 (14%)
Query: 29 IIIILALLLLFSLLCARWLYRYRHHLSSSSSTTPISITTTPHQDETRHGRQV-------G 81
II +L LLFS+L Y+Y ++T+P T+ +E HG G
Sbjct: 50 IIAMLMFTLLFSMLACCVCYKY-------TNTSPHG--TSSDTEEGGHGEVAFTRRTSRG 100
Query: 82 LDLATINSFPIILHYSTHSYS---EETQCSICLSILQDEEKVKVLPFCKHSYHPECVDQW 138
L INSFP L+ +C+ICL+ +DEE ++++P C H++H C+D W
Sbjct: 101 LGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVW 160
Query: 139 LTTQSSCPLCRASL 152
L+++S+CP+CRASL
Sbjct: 161 LSSRSTCPVCRASL 174
>AT4G40070.1 | RING/U-box superfamily protein |
Chr4:18576533-18577504 FORWARD LENGTH=323 | 201606
Length = 323
Score = 82.4 bits (202), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Query: 32 ILALLLLFSLLCARWLYRYRHHLSSSSSTTPISITTTPHQDETRHGRQVGLDLATINSFP 91
+ A+L+ L RH S+ ++ + +R G GLD A + SFP
Sbjct: 49 VFAVLVTLFFLTGLLSVYIRHCARSNPDSSTRYFRNRANDGSSRRG---GLDNAVVESFP 105
Query: 92 IILHYSTHS---YSEETQCSICLSILQDEEKVKVLPFCKHSYHPECVDQWLTTQSSCPLC 148
+ + S S++ +C+ICL+ L+D E V++LP C H +H +C+D WL + ++CP+C
Sbjct: 106 VFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVC 165
Query: 149 RASLQVNSSMP 159
R++L S+ P
Sbjct: 166 RSNLTAKSNKP 176