BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2850.1
(258 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 266 2e-82
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 266 2e-82
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 94 1e-23
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 266 bits (681), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 130/227 (57%), Positives = 170/227 (74%), Gaps = 5/227 (2%)
Query: 2 KFPHWRDAMTKEIQALESNNTWSLVTLPHDKRPIGCKWVYKIKFKPDGSIDRYKARLVAK 61
+F W AM EI A+E+ +TW + TLP +K+PIGCKWVYKIK+ DG+I+RYKARLVAK
Sbjct: 94 EFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAK 153
Query: 62 GYTQVEGLDYHDTFAPVAKLVTICVILSLAAIKHWPLHQLDVNNAFLQGDLDEEVYMKLP 121
GYTQ EG+D+ +TF+PV KL ++ +IL+++AI ++ LHQLD++NAFL GDLDEE+YMKLP
Sbjct: 154 GYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLP 213
Query: 122 PGYSV-HGE----NRVCRLNKSIYGLKQASRQWFSKFSSALVHKGFVQSLSDYSLFSYFK 176
PGY+ G+ N VC L KSIYGLKQASRQWF KFS L+ GFVQS SD++ F
Sbjct: 214 PGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKIT 273
Query: 177 SNVIIHVLVYVEDIIITGNNDLAISELKSGLGNVFSIKDLAHAESYL 223
+ + + VLVYV+DIII NND A+ ELKS L + F ++DL + +L
Sbjct: 274 ATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 320
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 266 bits (681), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 130/227 (57%), Positives = 170/227 (74%), Gaps = 5/227 (2%)
Query: 2 KFPHWRDAMTKEIQALESNNTWSLVTLPHDKRPIGCKWVYKIKFKPDGSIDRYKARLVAK 61
+F W AM EI A+E+ +TW + TLP +K+PIGCKWVYKIK+ DG+I+RYKARLVAK
Sbjct: 94 EFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAK 153
Query: 62 GYTQVEGLDYHDTFAPVAKLVTICVILSLAAIKHWPLHQLDVNNAFLQGDLDEEVYMKLP 121
GYTQ EG+D+ +TF+PV KL ++ +IL+++AI ++ LHQLD++NAFL GDLDEE+YMKLP
Sbjct: 154 GYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLP 213
Query: 122 PGYSV-HGE----NRVCRLNKSIYGLKQASRQWFSKFSSALVHKGFVQSLSDYSLFSYFK 176
PGY+ G+ N VC L KSIYGLKQASRQWF KFS L+ GFVQS SD++ F
Sbjct: 214 PGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKIT 273
Query: 177 SNVIIHVLVYVEDIIITGNNDLAISELKSGLGNVFSIKDLAHAESYL 223
+ + + VLVYV+DIII NND A+ ELKS L + F ++DL + +L
Sbjct: 274 ATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 320
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 94.4 bits (233), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%)
Query: 1 MKFPHWRDAMTKEIQALESNNTWSLVTLPHDKRPIGCKWVYKIKFKPDGSIDRYKARLVA 60
+K P W AM +E+ AL N TW LV P ++ +GCKWV+K K DG++DR KARLVA
Sbjct: 35 LKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVA 94
Query: 61 KGYTQVEGLDYHDTFAPVAKLVTICVILSLA 91
KG+ Q EG+ + +T++PV + TI IL++A
Sbjct: 95 KGFHQEEGIYFVETYSPVVRTATIRTILNVA 125