BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2870.1
(1354 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 374 e-110
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 374 e-110
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 174 6e-49
AT1G48720.1 | Copia-like polyprotein/retrotransposon | Chr1:1801... 102 2e-25
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 91 1e-20
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 374 bits (959), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/491 (39%), Positives = 289/491 (58%), Gaps = 9/491 (1%)
Query: 823 YEVVDNDEELNLCCFLMDCDPINYEEAIQEEKWENAMNEEINAIEKNDTWELTNLPKGYK 882
YE V L C +P Y EA + W AM++EI A+E TWE+ LP K
Sbjct: 66 YEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKK 125
Query: 883 PIGVKWVYKTKNNASGEVQRYKARLVAKGYKQRAGIDYSEVFAPVARMETIRLLISIAAQ 942
PIG KWVYK K N+ G ++RYKARLVAKGY Q+ GID+ E F+PV ++ +++L+++I+A
Sbjct: 126 PIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAI 185
Query: 943 YSWKIYQLDVKSAFLNGILEEEIYVEQPLGYV-RKGKE---DKVYKLKKALYGLKQAPRA 998
Y++ ++QLD+ +AFLNG L+EEIY++ P GY R+G + V LKK++YGLKQA R
Sbjct: 186 YNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQ 245
Query: 999 WNARIDKYFQENGFEKCPHEHTLYMKVKEGGGMLFVCL--YVDDLIFTGNDSRLFDEFKK 1056
W + GF + +HT ++K+ LF+C+ YVDD+I N+ DE K
Sbjct: 246 WFLKFSVTLIGFGFVQSHSDHTYFLKIT---ATLFLCVLVYVDDIIICSNNDAAVDELKS 302
Query: 1057 SMIKEFDMTDIGLMGHFLGIEVKQMENGIFISQSGYAKEVLKRFKMESCNPVNTPLESGV 1116
+ F + D+G + +FLG+E+ + GI I Q YA ++L + C P + P++ V
Sbjct: 303 QLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSV 362
Query: 1117 ELRKCSRRSDVDPTYFKSLIGSLRYLTYTRPDILYGVGLVNRYMETPDESHLNVAKRLLR 1176
S VD ++ LIG L YL TR DI + V ++++ E P +H ++L
Sbjct: 363 TFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILH 422
Query: 1177 YIKGTLNDGLFFSCEQDFKLIGYSDSDWGRDLDERKSTSGFVFFMGYTAFTWSSKKQPIV 1236
YIKGT+ GLF+S + + +L +SD+ + D R+ST+G+ F+G + +W SKKQ +V
Sbjct: 423 YIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVV 482
Query: 1237 TLSTCEAEYVAASSMVCHAIWLRNMLKHLQCPQVGPTEVFLDNKSAIALAKNPVCHERSK 1296
+ S+ EAEY A S +WL + LQ P PT +F DN +AI +A N V HER+K
Sbjct: 483 SKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTK 542
Query: 1297 HIDTRYHFIRE 1307
HI++ H +RE
Sbjct: 543 HIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 374 bits (959), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/491 (39%), Positives = 289/491 (58%), Gaps = 9/491 (1%)
Query: 823 YEVVDNDEELNLCCFLMDCDPINYEEAIQEEKWENAMNEEINAIEKNDTWELTNLPKGYK 882
YE V L C +P Y EA + W AM++EI A+E TWE+ LP K
Sbjct: 66 YEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKK 125
Query: 883 PIGVKWVYKTKNNASGEVQRYKARLVAKGYKQRAGIDYSEVFAPVARMETIRLLISIAAQ 942
PIG KWVYK K N+ G ++RYKARLVAKGY Q+ GID+ E F+PV ++ +++L+++I+A
Sbjct: 126 PIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAI 185
Query: 943 YSWKIYQLDVKSAFLNGILEEEIYVEQPLGYV-RKGKE---DKVYKLKKALYGLKQAPRA 998
Y++ ++QLD+ +AFLNG L+EEIY++ P GY R+G + V LKK++YGLKQA R
Sbjct: 186 YNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQ 245
Query: 999 WNARIDKYFQENGFEKCPHEHTLYMKVKEGGGMLFVCL--YVDDLIFTGNDSRLFDEFKK 1056
W + GF + +HT ++K+ LF+C+ YVDD+I N+ DE K
Sbjct: 246 WFLKFSVTLIGFGFVQSHSDHTYFLKIT---ATLFLCVLVYVDDIIICSNNDAAVDELKS 302
Query: 1057 SMIKEFDMTDIGLMGHFLGIEVKQMENGIFISQSGYAKEVLKRFKMESCNPVNTPLESGV 1116
+ F + D+G + +FLG+E+ + GI I Q YA ++L + C P + P++ V
Sbjct: 303 QLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSV 362
Query: 1117 ELRKCSRRSDVDPTYFKSLIGSLRYLTYTRPDILYGVGLVNRYMETPDESHLNVAKRLLR 1176
S VD ++ LIG L YL TR DI + V ++++ E P +H ++L
Sbjct: 363 TFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILH 422
Query: 1177 YIKGTLNDGLFFSCEQDFKLIGYSDSDWGRDLDERKSTSGFVFFMGYTAFTWSSKKQPIV 1236
YIKGT+ GLF+S + + +L +SD+ + D R+ST+G+ F+G + +W SKKQ +V
Sbjct: 423 YIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVV 482
Query: 1237 TLSTCEAEYVAASSMVCHAIWLRNMLKHLQCPQVGPTEVFLDNKSAIALAKNPVCHERSK 1296
+ S+ EAEY A S +WL + LQ P PT +F DN +AI +A N V HER+K
Sbjct: 483 SKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTK 542
Query: 1297 HIDTRYHFIRE 1307
HI++ H +RE
Sbjct: 543 HIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 174 bits (442), Expect = 6e-49, Method: Composition-based stats.
Identities = 83/226 (36%), Positives = 133/226 (58%), Gaps = 1/226 (0%)
Query: 1032 LFVCLYVDDLIFTGNDSRLFDEFKKSMIKEFDMTDIGLMGHFLGIEVKQMENGIFISQSG 1091
+++ LYVDD++ TG+ + L + + F M D+G + +FLGI++K +G+F+SQ+
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 1092 YAKEVLKRFKMESCNPVNTPLESGVELRKCSRRSDVDPTYFKSLIGSLRYLTYTRPDILY 1151
YA+++L M C P++TPL + S DP+ F+S++G+L+YLT TRPDI Y
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 1152 GVGLVNRYMETPDESHLNVAKRLLRYIKGTLNDGLFFSCEQDFKLIGYSDSDWGRDLDER 1211
V +V + M P + ++ KR+LRY+KGT+ GL+ + + DSDW R
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 1212 KSTSGFVFFMGYTAFTWSSKKQPIVTLSTCEAEYVAASSMVCHAIW 1257
+ST+GF F+G +WS+K+QP V+ S+ E EY A + W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>AT1G48720.1 | Copia-like polyprotein/retrotransposon |
Chr1:18018148-18018441 FORWARD LENGTH=97 | 201606
Length = 97
Score = 102 bits (253), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Query: 2 SNMIQPQIPRLTKENYEHWCIQMSVLLGSQDLWDIVQNGYVEPTQEEESFMNDVQKCVLK 61
SN + Q+P LTK NY++W ++M +LG+ D+W+IV+ G++EP E E ++ QK L+
Sbjct: 3 SNNVPFQVPVLTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEP--ENEGSLSQTQKDGLR 60
Query: 62 DSRKMDKKALFLIYQGIDGPTFEKVSEAKSSKEA 95
DSRK DKKAL LIYQG+D TFEKV EA S+K+
Sbjct: 61 DSRKRDKKALCLIYQGLDEDTFEKVVEATSAKDG 94
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 90.9 bits (224), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 64/101 (63%)
Query: 842 DPINYEEAIQEEKWENAMNEEINAIEKNDTWELTNLPKGYKPIGVKWVYKTKNNASGEVQ 901
+P + A+++ W AM EE++A+ +N TW L P +G KWV+KTK ++ G +
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 902 RYKARLVAKGYKQRAGIDYSEVFAPVARMETIRLLISIAAQ 942
R KARLVAKG+ Q GI + E ++PV R TIR ++++A Q
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ 127