BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000108.1_g2880.1
         (179 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C...   105   4e-29

>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
           ChrM:89617-90054 REVERSE LENGTH=145 | 201606
          Length = 145

 Score =  105 bits (262), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 78/127 (61%), Gaps = 6/127 (4%)

Query: 56  EWNRCNIIIENDS---IKVVKGSLVVMRGTRYGNLYKILGTIITGDVAVGISGRDPTAST 112
           EW R   +  + S   +KV+KG   +++G R+ +LY + G++ TG+  +  + +D    T
Sbjct: 13  EWERPRPVEASCSEGVLKVLKGCRTILKGNRHDSLYILQGSVETGESNLAETAKD---ET 69

Query: 113 RLWHMRLGHMSEKSLSLMCGKGLLKDMNKPCMEFCEHYVFGKAHRVTFSTSKHMSKEVLD 172
           RLWH RL HMS++ + L+  KG L       ++FCE  ++GK HRV FST +H +K  LD
Sbjct: 70  RLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLD 129

Query: 173 YLHTDVW 179
           Y+H+D+W
Sbjct: 130 YVHSDLW 136

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