BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2890.1
(651 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 288 8e-85
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 288 8e-85
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 91 4e-21
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 91 4e-20
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 288 bits (736), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 252/476 (52%), Gaps = 71/476 (14%)
Query: 197 EPVTFKQAITAEERESWLVAMQEEMESLHKNKTWEVVPLPEGKSVIGCKWMYKKKEDSSE 256
EP T+ +A +E W AM +E+ ++ TWE+ LP K IGCKW+YK K +S
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS-- 139
Query: 257 IKGTT--YKARLMAKGYAQKEGVDYNEIFSPVMKHTSIRVLLSIIAHSNLELEQLDVNTA 314
GT YKARL+AKGY Q+EG+D+ E FSPV K TS++++L+I A N L QLD++ A
Sbjct: 140 -DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNA 198
Query: 315 FLHGDLEEEIYLAQPEGYRVEGKE----NQVCRLRKSLYGLKQSPRQWYKRFDFFMLKHG 370
FL+GDL+EEIY+ P GY + N VC L+KS+YGLKQ+ RQW+ +F ++ G
Sbjct: 199 FLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFG 258
Query: 371 FRRS----DYIKKLREGDFIYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKDMGAAKK 426
F +S Y K+ F+ +L+YVDD++I S + +D+LKSQL F+++D+G K
Sbjct: 259 FVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKY 318
Query: 427 ILGMEIKRE--------------------------------------------------- 435
LG+EI R
Sbjct: 319 FLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAY 378
Query: 436 -RSIGSSMYAMVCTHLDISQTVSVVSWFMTNPGKTYCEAVKWVLRYLKGTVDTSLCFGGD 494
R IG MY + T LDIS V+ +S F P + +AV +L Y+KGTV L +
Sbjct: 379 RRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQ 437
Query: 495 T-CQVSGYVDSDYAGDLDRSRSTTGYVFRVHGAPVSWRSMLQSTVALSTTESEYMAMAEG 553
Q+ + D+ + D RST GY + + +SW+S Q V+ S+ E+EY A++
Sbjct: 438 AEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFA 497
Query: 554 VKEALWLWSLLDDLGIK-QEFVDVWCDSQSAIHLAKNQVHHARTKHIDVRYHFVRD 608
E +WL +L + + ++CD+ +AIH+A N V H RTKHI+ H VR+
Sbjct: 498 TDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 288 bits (736), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 252/476 (52%), Gaps = 71/476 (14%)
Query: 197 EPVTFKQAITAEERESWLVAMQEEMESLHKNKTWEVVPLPEGKSVIGCKWMYKKKEDSSE 256
EP T+ +A +E W AM +E+ ++ TWE+ LP K IGCKW+YK K +S
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS-- 139
Query: 257 IKGTT--YKARLMAKGYAQKEGVDYNEIFSPVMKHTSIRVLLSIIAHSNLELEQLDVNTA 314
GT YKARL+AKGY Q+EG+D+ E FSPV K TS++++L+I A N L QLD++ A
Sbjct: 140 -DGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNA 198
Query: 315 FLHGDLEEEIYLAQPEGYRVEGKE----NQVCRLRKSLYGLKQSPRQWYKRFDFFMLKHG 370
FL+GDL+EEIY+ P GY + N VC L+KS+YGLKQ+ RQW+ +F ++ G
Sbjct: 199 FLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFG 258
Query: 371 FRRS----DYIKKLREGDFIYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKDMGAAKK 426
F +S Y K+ F+ +L+YVDD++I S + +D+LKSQL F+++D+G K
Sbjct: 259 FVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKY 318
Query: 427 ILGMEIKRE--------------------------------------------------- 435
LG+EI R
Sbjct: 319 FLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAY 378
Query: 436 -RSIGSSMYAMVCTHLDISQTVSVVSWFMTNPGKTYCEAVKWVLRYLKGTVDTSLCFGGD 494
R IG MY + T LDIS V+ +S F P + +AV +L Y+KGTV L +
Sbjct: 379 RRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQ 437
Query: 495 T-CQVSGYVDSDYAGDLDRSRSTTGYVFRVHGAPVSWRSMLQSTVALSTTESEYMAMAEG 553
Q+ + D+ + D RST GY + + +SW+S Q V+ S+ E+EY A++
Sbjct: 438 AEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFA 497
Query: 554 VKEALWLWSLLDDLGIK-QEFVDVWCDSQSAIHLAKNQVHHARTKHIDVRYHFVRD 608
E +WL +L + + ++CD+ +AIH+A N V H RTKHI+ H VR+
Sbjct: 498 TDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 91.3 bits (225), Expect = 4e-21, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 188 EYALSVEDDEPVTFKQAITAEERESWLVAMQEEMESLHKNKTWEVVPLPEGKSVIGCKWM 247
+Y+L++ K I A + W AMQEE+++L +NKTW +VP P ++++GCKW+
Sbjct: 15 KYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWV 74
Query: 248 YKKKEDSSEIKGT--TYKARLMAKGYAQKEGVDYNEIFSPVMKHTSIRVLLSI 298
+K K S GT KARL+AKG+ Q+EG+ + E +SPV++ +IR +L++
Sbjct: 75 FKTKLHSD---GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 90.9 bits (224), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 97/225 (43%), Gaps = 51/225 (22%)
Query: 386 IYLLLYVDDMLIASRSMVEIDKLKSQLSQEFEMKDMGAAKKILGMEIKRE---------- 435
+YLLLYVDD+L+ S ++ L QLS F MKD+G LG++IK
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 436 ----------------------------------------RSIGSSMYAMVCTHLDISQT 455
RSI ++ + T DIS
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 120
Query: 456 VSVVSWFMTNPGKTYCEAVKWVLRYLKGTVDTSLCFGGDT-CQVSGYVDSDYAGDLDRSR 514
V++V M P + +K VLRY+KGT+ L ++ V + DSD+AG R
Sbjct: 121 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRR 180
Query: 515 STTGYVFRVHGAPVSWRSMLQSTVALSTTESEYMAMAEGVKEALW 559
STTG+ + +SW + Q TV+ S+TE+EY A+A E W
Sbjct: 181 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225