BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g2920.1
(200 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G14460.1 | LRR and NB-ARC domains-containing disease resistan... 62 4e-11
AT3G14470.2 | NB-ARC domain-containing disease resistance protei... 54 2e-08
AT3G14470.1 | NB-ARC domain-containing disease resistance protei... 54 2e-08
AT3G04220.1 | Disease resistance protein (TIR-NBS-LRR class) fam... 45 3e-05
AT3G04220.3 | Disease resistance protein (TIR-NBS-LRR class) fam... 45 3e-05
>AT3G14460.1 | LRR and NB-ARC domains-containing disease resistance
protein | Chr3:4851990-4856264 REVERSE LENGTH=1424 |
201606
Length = 1424
Score = 62.0 bits (149), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 26 EEMLRELQPHSNLEELSIESYSGLKFPSWIGSGSMLPNLRSLVLHRCMKCIELPATLGLL 85
+E+LR L+PH +L+ IESY G FP W+G S + S+ L C CI LP +G L
Sbjct: 749 KEVLRMLEPHPHLKTFCIESYQGGAFPKWLGDSSFF-GITSVTLSSCNLCISLPP-VGQL 806
Query: 86 PSLEYLRIYEAEKLTHLG 103
PSL+YL I + L +G
Sbjct: 807 PSLKYLSIEKFNILQKVG 824
>AT3G14470.2 | NB-ARC domain-containing disease resistance protein |
Chr3:4857940-4861104 FORWARD LENGTH=1054 | 201606
Length = 1054
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 1 MNKKKHLISLSFKF----SERYEEGNPKV----EEMLRELQPHSNLEELSIESYSGLKFP 52
+N KKHL + F + S NP E+ +L+PH ++E+L+IE Y G +FP
Sbjct: 722 LNSKKHLREIDFVWRTGSSSSENNTNPHRTQNEAEVFEKLRPHRHIEKLAIERYKGRRFP 781
Query: 53 SWIGSGSMLPNLRSLVLHRCMKCIELPATLGLLPSLEYLRIYEAEKLTHLG 103
W+ S + + L C C LP+ LG LP L+ L I L +G
Sbjct: 782 DWLSDPS-FSRIVCIRLRECQYCTSLPS-LGQLPCLKELHISGMVGLQSIG 830
>AT3G14470.1 | NB-ARC domain-containing disease resistance protein |
Chr3:4857940-4861104 FORWARD LENGTH=1054 | 201606
Length = 1054
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 1 MNKKKHLISLSFKF----SERYEEGNPKV----EEMLRELQPHSNLEELSIESYSGLKFP 52
+N KKHL + F + S NP E+ +L+PH ++E+L+IE Y G +FP
Sbjct: 722 LNSKKHLREIDFVWRTGSSSSENNTNPHRTQNEAEVFEKLRPHRHIEKLAIERYKGRRFP 781
Query: 53 SWIGSGSMLPNLRSLVLHRCMKCIELPATLGLLPSLEYLRIYEAEKLTHLG 103
W+ S + + L C C LP+ LG LP L+ L I L +G
Sbjct: 782 DWLSDPS-FSRIVCIRLRECQYCTSLPS-LGQLPCLKELHISGMVGLQSIG 830
>AT3G04220.1 | Disease resistance protein (TIR-NBS-LRR class) family
| Chr3:1109118-1112188 REVERSE LENGTH=867 | 201606
Length = 867
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 29 LRELQPHSNLEELSIESYSGL-KFPSWIGSGSMLPNLRSLVLHRCMKCIELPATLGLLPS 87
L +L +NL+ LSIE S L K PS IG + NL+ + L C+ +ELP++ G L +
Sbjct: 684 LPDLSTATNLQRLSIERCSSLVKLPSSIGEAT---NLKKINLRECLSLVELPSSFGNLTN 740
Query: 88 LEYLRIYEAEKLTHL 102
L+ L + E L L
Sbjct: 741 LQELDLRECSSLVEL 755
>AT3G04220.3 | Disease resistance protein (TIR-NBS-LRR class) family
| Chr3:1109118-1112188 REVERSE LENGTH=896 | 201606
Length = 896
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 29 LRELQPHSNLEELSIESYSGL-KFPSWIGSGSMLPNLRSLVLHRCMKCIELPATLGLLPS 87
L +L +NL+ LSIE S L K PS IG + NL+ + L C+ +ELP++ G L +
Sbjct: 713 LPDLSTATNLQRLSIERCSSLVKLPSSIGEAT---NLKKINLRECLSLVELPSSFGNLTN 769
Query: 88 LEYLRIYEAEKLTHL 102
L+ L + E L L
Sbjct: 770 LQELDLRECSSLVEL 784