BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3000.1
(198 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 117 3e-30
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 117 3e-30
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 87 8e-21
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 82 2e-20
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 117 bits (293), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 101/206 (49%), Gaps = 38/206 (18%)
Query: 1 MTRPDISFGVNYVAQFMHAPTDSHLHLVKRILKYLKGTIGAGLSISPGDLTNLRAYSDSD 60
+TR DISF VN ++QF AP +H V +IL Y+KGT+G GL S L+ +SD+
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 61 WAGCPDSRRSTS-----------------------------------AASELLWVSYALE 85
+ C D+RRST+ A E++W++
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFR 509
Query: 86 ELGVTLSPPFQLFCDNLSAKHLAMNPVFHARTKHIEIDYHFVREL-VAAGMLTLEFIPSS 144
EL + LS P LFCDN +A H+A N VFH RTKHIE D H VRE V L+ F
Sbjct: 510 ELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYD 569
Query: 145 SQLADVFTKGLSNPLFSLLLHSLMSF 170
Q D FT+ LS L +++ + F
Sbjct: 570 EQ--DGFTEYLSPILRGTIMYIVSMF 593
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 117 bits (293), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 101/206 (49%), Gaps = 38/206 (18%)
Query: 1 MTRPDISFGVNYVAQFMHAPTDSHLHLVKRILKYLKGTIGAGLSISPGDLTNLRAYSDSD 60
+TR DISF VN ++QF AP +H V +IL Y+KGT+G GL S L+ +SD+
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDAS 449
Query: 61 WAGCPDSRRSTS-----------------------------------AASELLWVSYALE 85
+ C D+RRST+ A E++W++
Sbjct: 450 FQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFR 509
Query: 86 ELGVTLSPPFQLFCDNLSAKHLAMNPVFHARTKHIEIDYHFVREL-VAAGMLTLEFIPSS 144
EL + LS P LFCDN +A H+A N VFH RTKHIE D H VRE V L+ F
Sbjct: 510 ELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYD 569
Query: 145 SQLADVFTKGLSNPLFSLLLHSLMSF 170
Q D FT+ LS L +++ + F
Sbjct: 570 EQ--DGFTEYLSPILRGTIMYIVSMF 593
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 87.0 bits (214), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%)
Query: 1 MTRPDISFGVNYVAQFMHAPTDSHLHLVKRILKYLKGTIGAGLSISPGDLTNLRAYSDSD 60
+TRPDIS+ VN V Q MH PT + L+KR+L+Y+KGTI GL I N++A+ DSD
Sbjct: 112 LTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 171
Query: 61 WAGCPDSRRSTSAASELL 78
WAGC +RRST+ L
Sbjct: 172 WAGCTSTRRSTTGFCTFL 189
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 82.4 bits (202), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 1 MTRPDISFGVNYVAQFMHAPTDSHLHLVKRILKYLKGTIGAGLSISPGDLTNLRAYSDSD 60
+TRPD++F VN ++QF A + + V ++L Y+KGT+G GL S L+A++DSD
Sbjct: 5 ITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSD 64
Query: 61 WAGCPDSRRSTSAASEL--LWVSYALEELGVTLSPPFQLFCDNLSAKHL 107
WA CPD+RRS + L LW AL + ++ P L N+ A HL
Sbjct: 65 WASCPDTRRSVTGFCSLVPLWFLGALRK---SILSPGLLQRQNIEALHL 110