BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3040.1
(157 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 135 3e-37
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 135 3e-37
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 107 2e-29
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 56 1e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 135 bits (340), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 88/142 (61%)
Query: 8 HLMAAKRILRYLKGTLTHGLIFRRATSLPLIGYSDADWAGSPDDRRSTSGYCVYLGPNLI 67
H A +IL Y+KGT+ GL + + L +SDA + D RRST+GYC++LG +LI
Sbjct: 413 HQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLI 472
Query: 68 EWASKTQPTVARSSTEAEFRAVALASTEVLWLRNLLKELGFDKGTPPIIHCDNLSTTYLS 127
W SK Q V++SS EAE+RA++ A+ E++WL +EL P ++ CDN + +++
Sbjct: 473 SWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIA 532
Query: 128 VNPILHSRTKHVAIDFHFVREQ 149
N + H RTKH+ D H VRE+
Sbjct: 533 TNAVFHERTKHIESDCHSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 135 bits (340), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 88/142 (61%)
Query: 8 HLMAAKRILRYLKGTLTHGLIFRRATSLPLIGYSDADWAGSPDDRRSTSGYCVYLGPNLI 67
H A +IL Y+KGT+ GL + + L +SDA + D RRST+GYC++LG +LI
Sbjct: 413 HQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLI 472
Query: 68 EWASKTQPTVARSSTEAEFRAVALASTEVLWLRNLLKELGFDKGTPPIIHCDNLSTTYLS 127
W SK Q V++SS EAE+RA++ A+ E++WL +EL P ++ CDN + +++
Sbjct: 473 SWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIA 532
Query: 128 VNPILHSRTKHVAIDFHFVREQ 149
N + H RTKH+ D H VRE+
Sbjct: 533 TNAVFHERTKHIESDCHSVRER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 107 bits (268), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 67/98 (68%)
Query: 1 MAKPCSVHLMAAKRILRYLKGTLTHGLIFRRATSLPLIGYSDADWAGSPDDRRSTSGYCV 60
M +P KR+LRY+KGT+ HGL + + L + + D+DWAG RRST+G+C
Sbjct: 128 MHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCT 187
Query: 61 YLGPNLIEWASKTQPTVARSSTEAEFRAVALASTEVLW 98
+LG N+I W++K QPTV+RSSTE E+RA+AL + E+ W
Sbjct: 188 FLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 55.8 bits (133), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 6 SVHLMAAKRILRYLKGTLTHGLIFRRATSLPLIGYSDADWAGSPDDRRSTSGYC 59
+ + A ++L Y+KGT+ GL + + L L ++D+DWA PD RRS +G+C
Sbjct: 26 TAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDWASCPDTRRSVTGFC 79