BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3050.1
(1038 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 255 2e-70
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 255 2e-70
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 131 6e-35
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 83 2e-17
ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C... 57 3e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 255 bits (652), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 120/274 (43%), Positives = 183/274 (66%), Gaps = 4/274 (1%)
Query: 760 EPSTYIQASKFDHWKIAMSEEMKALLKNNTWTLVPPPSNCNIVGCKWIYKVKQKADGSIQ 819
EPSTY +A +F W AM +E+ A+ +TW + P N +GCKW+YK+K +DG+I+
Sbjct: 85 EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144
Query: 820 RYKARLVARGYNQEHGVDYDETYSPVVRPATIRSVLSIAISGNWQIQQLDVKNAFLNGDL 879
RYKARLVA+GY Q+ G+D+ ET+SPV + +++ +L+I+ N+ + QLD+ NAFLNGDL
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204
Query: 880 AELVYMSQPKGFESPSH----PHHVSKLNKAIYGLKQAPRAWHSRFSTSLLQYGFSRSIS 935
E +YM P G+ + P+ V L K+IYGLKQA R W +FS +L+ +GF +S S
Sbjct: 205 DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHS 264
Query: 936 DPSMFHFHFSKDIIILLLYVDDIIVTSSSSSLLNKFITWLKNQFEMSDLGPLSYFLGMEA 995
D + F + + +L+YVDDII+ S++ + +++ + LK+ F++ DLGPL YFLG+E
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324
Query: 996 NRTSDSMILTQTKYSMELLDRFGLLNSKPVSTPV 1029
R++ + + Q KY+++LLD GLL KP S P+
Sbjct: 325 ARSAAGINICQRKYALDLLDETGLLGCKPSSVPM 358
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 255 bits (652), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 120/274 (43%), Positives = 183/274 (66%), Gaps = 4/274 (1%)
Query: 760 EPSTYIQASKFDHWKIAMSEEMKALLKNNTWTLVPPPSNCNIVGCKWIYKVKQKADGSIQ 819
EPSTY +A +F W AM +E+ A+ +TW + P N +GCKW+YK+K +DG+I+
Sbjct: 85 EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144
Query: 820 RYKARLVARGYNQEHGVDYDETYSPVVRPATIRSVLSIAISGNWQIQQLDVKNAFLNGDL 879
RYKARLVA+GY Q+ G+D+ ET+SPV + +++ +L+I+ N+ + QLD+ NAFLNGDL
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204
Query: 880 AELVYMSQPKGFESPSH----PHHVSKLNKAIYGLKQAPRAWHSRFSTSLLQYGFSRSIS 935
E +YM P G+ + P+ V L K+IYGLKQA R W +FS +L+ +GF +S S
Sbjct: 205 DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHS 264
Query: 936 DPSMFHFHFSKDIIILLLYVDDIIVTSSSSSLLNKFITWLKNQFEMSDLGPLSYFLGMEA 995
D + F + + +L+YVDDII+ S++ + +++ + LK+ F++ DLGPL YFLG+E
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324
Query: 996 NRTSDSMILTQTKYSMELLDRFGLLNSKPVSTPV 1029
R++ + + Q KY+++LLD GLL KP S P+
Sbjct: 325 ARSAAGINICQRKYALDLLDETGLLGCKPSSVPM 358
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 131 bits (330), Expect = 6e-35, Method: Composition-based stats.
Identities = 69/146 (47%), Positives = 93/146 (63%), Gaps = 18/146 (12%)
Query: 727 MITRTRDGTRK--PRVLLTTPTAVSSISTGTSNLYEPSTYIQASKFDHWKIAMSEEMKAL 784
M+TR++ G K P+ LT T + EP + I A K W AM EE+ AL
Sbjct: 1 MLTRSKAGINKLNPKYSLTITTTIKK---------EPKSVIFALKDPGWCQAMQEELDAL 51
Query: 785 LKNNTWTLVPPPSNCNIVGCKWIYKVKQKADGSIQRYKARLVARGYNQEHGVDYDETYSP 844
+N TW LVPPP N NI+GCKW++K K +DG++ R KARLVA+G++QE G+ + ETYSP
Sbjct: 52 SRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSP 111
Query: 845 VVRPATIRSVLSIAISGNWQIQQLDV 870
VVR ATIR++L++A QQL+V
Sbjct: 112 VVRTATIRTILNVA-------QQLEV 130
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 83.2 bits (204), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 58/81 (71%)
Query: 949 IILLLYVDDIIVTSSSSSLLNKFITWLKNQFEMSDLGPLSYFLGMEANRTSDSMILTQTK 1008
+ LLLYVDDI++T SS++LLN I L + F M DLGP+ YFLG++ + L+QTK
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 1009 YSMELLDRFGLLNSKPVSTPV 1029
Y+ ++L+ G+L+ KP+STP+
Sbjct: 61 YAEQILNNAGMLDCKPMSTPL 81
>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
ChrM:89617-90054 REVERSE LENGTH=145 | 201606
Length = 145
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 323 RILLIGTISNSLFQLSPNKANSDKTPLSLLASPLASSPSATSEVWHRRLAHPHLNIFNLV 382
R +L G +SL+ L + + S LA + + +WH RLAH L+
Sbjct: 36 RTILKGNRHDSLYILQGSVETGE--------SNLAETAKDETRLWHSRLAHMSQRGMELL 87
Query: 383 VQNNCLSLKKSVMKSFKCNSCIMGKHHRLPFTSVIHSSTRPNELIHSDLWVETAITL 439
V+ L K F C CI GK HR+ F++ H++ P + +HSDLW ++ L
Sbjct: 88 VKKGFLDSSKVSSLKF-CEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPSVPL 143