BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3110.1
(261 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G49720.3 | transmembrane protein | Chr3:18440192-18441655 REV... 387 e-137
AT3G49720.2 | transmembrane protein | Chr3:18440192-18441655 REV... 387 e-137
AT3G49720.1 | transmembrane protein | Chr3:18440192-18441655 REV... 387 e-137
AT5G65810.1 | transmembrane protein | Chr5:26337833-26339144 REV... 382 e-135
>AT3G49720.3 | transmembrane protein | Chr3:18440192-18441655
REVERSE LENGTH=261 | 201606
Length = 261
Score = 387 bits (994), Expect = e-137, Method: Compositional matrix adjust.
Identities = 186/261 (71%), Positives = 216/261 (82%)
Query: 1 MSRRPGNPARRFGESGSIPFVGSLNQKSRSSPLLSIGLVIVGALLLIGYSYSGSGGHVNR 60
M+RR RR G+ GS PF G+L+ KSRSSPLLSI LV+VGA LLIGY+YSG G +
Sbjct: 1 MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSI 60
Query: 61 EAASKVEGGLSCTLEVQTAIPILKKAYGESMRKVLHVGPDSCSVVSKLLKEEDVEAWGVE 120
+ SKV G SCT EVQ AIP+LKKAYG+ MRKVLHVGPD+CSVVS LLKEE+ EAWGVE
Sbjct: 61 KEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVE 120
Query: 121 PYEIEDADGHCKSLMRKGIVRVADIKFPLPYREKSFNLVIVSDALDYLSPKYLNKTLPDL 180
PY+IEDAD HCKS + KG+VRVADIKFPLPYR KSF+LVIVSDALDYLSPKYLNKT+P+L
Sbjct: 121 PYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPEL 180
Query: 181 ARVSIDGLVIFAGYPGQARAKVAELSRFGKPAKLRSSSWWVRYFVQTGLEENESAIKKFE 240
ARV+ DG+V+FAG PGQ RAKVAELS+FG+PAK+RS+SWW R+FVQT LEEN++ KKFE
Sbjct: 181 ARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFE 240
Query: 241 QAATKNSYKSSCQVFHLSAYH 261
QA +K YK +CQVFHL H
Sbjct: 241 QAVSKGLYKPACQVFHLKPLH 261
>AT3G49720.2 | transmembrane protein | Chr3:18440192-18441655
REVERSE LENGTH=261 | 201606
Length = 261
Score = 387 bits (994), Expect = e-137, Method: Compositional matrix adjust.
Identities = 186/261 (71%), Positives = 216/261 (82%)
Query: 1 MSRRPGNPARRFGESGSIPFVGSLNQKSRSSPLLSIGLVIVGALLLIGYSYSGSGGHVNR 60
M+RR RR G+ GS PF G+L+ KSRSSPLLSI LV+VGA LLIGY+YSG G +
Sbjct: 1 MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSI 60
Query: 61 EAASKVEGGLSCTLEVQTAIPILKKAYGESMRKVLHVGPDSCSVVSKLLKEEDVEAWGVE 120
+ SKV G SCT EVQ AIP+LKKAYG+ MRKVLHVGPD+CSVVS LLKEE+ EAWGVE
Sbjct: 61 KEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVE 120
Query: 121 PYEIEDADGHCKSLMRKGIVRVADIKFPLPYREKSFNLVIVSDALDYLSPKYLNKTLPDL 180
PY+IEDAD HCKS + KG+VRVADIKFPLPYR KSF+LVIVSDALDYLSPKYLNKT+P+L
Sbjct: 121 PYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPEL 180
Query: 181 ARVSIDGLVIFAGYPGQARAKVAELSRFGKPAKLRSSSWWVRYFVQTGLEENESAIKKFE 240
ARV+ DG+V+FAG PGQ RAKVAELS+FG+PAK+RS+SWW R+FVQT LEEN++ KKFE
Sbjct: 181 ARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFE 240
Query: 241 QAATKNSYKSSCQVFHLSAYH 261
QA +K YK +CQVFHL H
Sbjct: 241 QAVSKGLYKPACQVFHLKPLH 261
>AT3G49720.1 | transmembrane protein | Chr3:18440192-18441655
REVERSE LENGTH=261 | 201606
Length = 261
Score = 387 bits (994), Expect = e-137, Method: Compositional matrix adjust.
Identities = 186/261 (71%), Positives = 216/261 (82%)
Query: 1 MSRRPGNPARRFGESGSIPFVGSLNQKSRSSPLLSIGLVIVGALLLIGYSYSGSGGHVNR 60
M+RR RR G+ GS PF G+L+ KSRSSPLLSI LV+VGA LLIGY+YSG G +
Sbjct: 1 MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKSI 60
Query: 61 EAASKVEGGLSCTLEVQTAIPILKKAYGESMRKVLHVGPDSCSVVSKLLKEEDVEAWGVE 120
+ SKV G SCT EVQ AIP+LKKAYG+ MRKVLHVGPD+CSVVS LLKEE+ EAWGVE
Sbjct: 61 KEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGVE 120
Query: 121 PYEIEDADGHCKSLMRKGIVRVADIKFPLPYREKSFNLVIVSDALDYLSPKYLNKTLPDL 180
PY+IEDAD HCKS + KG+VRVADIKFPLPYR KSF+LVIVSDALDYLSPKYLNKT+P+L
Sbjct: 121 PYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPEL 180
Query: 181 ARVSIDGLVIFAGYPGQARAKVAELSRFGKPAKLRSSSWWVRYFVQTGLEENESAIKKFE 240
ARV+ DG+V+FAG PGQ RAKVAELS+FG+PAK+RS+SWW R+FVQT LEEN++ KKFE
Sbjct: 181 ARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKFE 240
Query: 241 QAATKNSYKSSCQVFHLSAYH 261
QA +K YK +CQVFHL H
Sbjct: 241 QAVSKGLYKPACQVFHLKPLH 261
>AT5G65810.1 | transmembrane protein | Chr5:26337833-26339144
REVERSE LENGTH=258 | 201606
Length = 258
Score = 382 bits (981), Expect = e-135, Method: Compositional matrix adjust.
Identities = 184/261 (70%), Positives = 218/261 (83%), Gaps = 3/261 (1%)
Query: 1 MSRRPGNPARRFGESGSIPFVGSLNQKSRSSPLLSIGLVIVGALLLIGYSYSGSGGHVNR 60
MSRR RR G+SGS PFVG+L+ KSRSSPLLS+ LV+VGA LLIGY+YSG G +
Sbjct: 1 MSRRQ---VRRVGDSGSFPFVGALHSKSRSSPLLSVCLVLVGACLLIGYAYSGPGMFKSI 57
Query: 61 EAASKVEGGLSCTLEVQTAIPILKKAYGESMRKVLHVGPDSCSVVSKLLKEEDVEAWGVE 120
SK+ G SCT EVQ AIPILK AYG+SMRKVLHVGP++CSVVS LL EE+ EAWGVE
Sbjct: 58 REVSKITGDYSCTAEVQRAIPILKSAYGDSMRKVLHVGPETCSVVSSLLNEEETEAWGVE 117
Query: 121 PYEIEDADGHCKSLMRKGIVRVADIKFPLPYREKSFNLVIVSDALDYLSPKYLNKTLPDL 180
PY++EDAD +CKSL+ KG+VRVADIKFPLPYR KSF+LVIVSDALDYLSP+YLNKT+P+L
Sbjct: 118 PYDVEDADSNCKSLLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPEL 177
Query: 181 ARVSIDGLVIFAGYPGQARAKVAELSRFGKPAKLRSSSWWVRYFVQTGLEENESAIKKFE 240
ARV+ DG+V+ AG PGQ +AK ELS+FG+PAK+RSSSWW+R+F QT LEENE+A KKFE
Sbjct: 178 ARVASDGVVLLAGNPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASKKFE 237
Query: 241 QAATKNSYKSSCQVFHLSAYH 261
QAA+K+SYK +CQVFHL H
Sbjct: 238 QAASKSSYKPACQVFHLKPLH 258