BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3150.1
(1427 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 350 e-101
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 350 e-101
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 216 3e-63
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 79 3e-17
AT1G34070.1 | Copia-like polyprotein/retrotransposon | Chr1:1240... 84 8e-17
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 350 bits (899), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/498 (37%), Positives = 271/498 (54%), Gaps = 44/498 (8%)
Query: 949 QEPNNFAQASKVQQWISAMEDEINALQKNNTWTLIPRRPNMNLVDSKWIYKIKQRPDGSV 1008
+EP+ + +A + W AM+DEI A++ +TW + PN + KW+YKIK DG++
Sbjct: 84 KEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTI 143
Query: 1009 LRYKARLVARG-------------------------------------QLDVKNAFLNGD 1031
RYKARLVA+G QLD+ NAFLNGD
Sbjct: 144 ERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGD 203
Query: 1032 LDEDVYMTQPKGFLNPEF----PTHVCKLNKALYGLKQAPRAWHKKFSDCLLKLNFTQSI 1087
LDE++YM P G+ + P VC L K++YGLKQA R W KFS L+ F QS
Sbjct: 204 LDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSH 263
Query: 1088 SDSSMFYLRRPNSIIILLLYVDDILVTGSSSTDLIKLIKHLKLSFDMTDMGVLSYFLGME 1147
SD + F + +L+YVDDI++ ++ + +L LK F + D+G L YFLG+E
Sbjct: 264 SDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLE 323
Query: 1148 ASRDNTHLKLTQKKYINDLLNRFGLNSSKPVSTPVITGTKLSKSEGIPLDDPQSFRSLVG 1207
+R + + Q+KY DLL+ GL KP S P+ S G D +++R L+G
Sbjct: 324 IARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIG 383
Query: 1208 ALQYLTLTRPDITYSVNQVSKFMHKPSSIHLIAAKRILRYLKGTIDIGLCFRKASSHHLL 1267
L YL +TR DI+++VN++S+F P H A +IL Y+KGT+ GL + + L
Sbjct: 384 RLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQ 443
Query: 1268 GYSDADWAGSPDDRRSTTGSCVYLGPNIIIWASKTQPTVARSSTEAEFRAVSHTSAEIKW 1327
+SDA + D RRST G C++LG ++I W SK Q V++SS EAE+RA+S + E+ W
Sbjct: 444 VFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMW 503
Query: 1328 LHNLLRELGIKVTSTPVIYCDNISTTYLSVNPVLHSKTKHSAIDFHFVREQ-VKDGSLKV 1386
L REL + ++ +++CDN + +++ N V H +TKH D H VRE+ V +L
Sbjct: 504 LAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSY 563
Query: 1387 HYLPGDSQVADIFTKGLS 1404
+ D Q D FT+ LS
Sbjct: 564 SFQAYDEQ--DGFTEYLS 579
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 350 bits (899), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/498 (37%), Positives = 271/498 (54%), Gaps = 44/498 (8%)
Query: 949 QEPNNFAQASKVQQWISAMEDEINALQKNNTWTLIPRRPNMNLVDSKWIYKIKQRPDGSV 1008
+EP+ + +A + W AM+DEI A++ +TW + PN + KW+YKIK DG++
Sbjct: 84 KEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTI 143
Query: 1009 LRYKARLVARG-------------------------------------QLDVKNAFLNGD 1031
RYKARLVA+G QLD+ NAFLNGD
Sbjct: 144 ERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGD 203
Query: 1032 LDEDVYMTQPKGFLNPEF----PTHVCKLNKALYGLKQAPRAWHKKFSDCLLKLNFTQSI 1087
LDE++YM P G+ + P VC L K++YGLKQA R W KFS L+ F QS
Sbjct: 204 LDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSH 263
Query: 1088 SDSSMFYLRRPNSIIILLLYVDDILVTGSSSTDLIKLIKHLKLSFDMTDMGVLSYFLGME 1147
SD + F + +L+YVDDI++ ++ + +L LK F + D+G L YFLG+E
Sbjct: 264 SDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLE 323
Query: 1148 ASRDNTHLKLTQKKYINDLLNRFGLNSSKPVSTPVITGTKLSKSEGIPLDDPQSFRSLVG 1207
+R + + Q+KY DLL+ GL KP S P+ S G D +++R L+G
Sbjct: 324 IARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIG 383
Query: 1208 ALQYLTLTRPDITYSVNQVSKFMHKPSSIHLIAAKRILRYLKGTIDIGLCFRKASSHHLL 1267
L YL +TR DI+++VN++S+F P H A +IL Y+KGT+ GL + + L
Sbjct: 384 RLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQ 443
Query: 1268 GYSDADWAGSPDDRRSTTGSCVYLGPNIIIWASKTQPTVARSSTEAEFRAVSHTSAEIKW 1327
+SDA + D RRST G C++LG ++I W SK Q V++SS EAE+RA+S + E+ W
Sbjct: 444 VFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMW 503
Query: 1328 LHNLLRELGIKVTSTPVIYCDNISTTYLSVNPVLHSKTKHSAIDFHFVREQ-VKDGSLKV 1386
L REL + ++ +++CDN + +++ N V H +TKH D H VRE+ V +L
Sbjct: 504 LAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSY 563
Query: 1387 HYLPGDSQVADIFTKGLS 1404
+ D Q D FT+ LS
Sbjct: 564 SFQAYDEQ--DGFTEYLS 579
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 216 bits (549), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/226 (50%), Positives = 150/226 (66%), Gaps = 1/226 (0%)
Query: 1102 IILLLYVDDILVTGSSSTDLIKLIKHLKLSFDMTDMGVLSYFLGMEASRDNTHLKLTQKK 1161
+ LLLYVDDIL+TGSS+T L LI L +F M D+G + YFLG++ + L L+Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 1162 YINDLLNRFGLNSSKPVSTPVITGTKLSKSEGIPLDDPQSFRSLVGALQYLTLTRPDITY 1221
Y +LN G+ KP+STP+ S S DP FRS+VGALQYLTLTRPDI+Y
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTA-KYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 1222 SVNQVSKFMHKPSSIHLIAAKRILRYLKGTIDIGLCFRKASSHHLLGYSDADWAGSPDDR 1281
+VN V + MH+P+ KR+LRY+KGTI GL K S ++ + D+DWAG R
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 1282 RSTTGSCVYLGPNIIIWASKTQPTVARSSTEAEFRAVSHTSAEIKW 1327
RSTTG C +LG NII W++K QPTV+RSSTE E+RA++ T+AE+ W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 79.3 bits (194), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%)
Query: 1211 YLTLTRPDITYSVNQVSKFMHKPSSIHLIAAKRILRYLKGTIDIGLCFRKASSHHLLGYS 1270
YLT+TRPD+T++VN++S+F + + A ++L Y+KGT+ GL + S L ++
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 1271 DADWAGSPDDRRSTTGSC 1288
D+DWA PD RRS TG C
Sbjct: 62 DSDWASCPDTRRSVTGFC 79
>AT1G34070.1 | Copia-like polyprotein/retrotransposon |
Chr1:12402283-12403209 FORWARD LENGTH=308 | 201606
Length = 308
Score = 83.6 bits (205), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 27/260 (10%)
Query: 25 LTNIANLVSIRLD--NTNYLLWKSQLLPILHSQDLYKFVNGSHPPPPEFLSTSSSSSSAP 82
++NI + + + LD +NY W+ L S D+ ++G+ L T+++ +
Sbjct: 13 VSNIKSHIPVMLDIEESNYDAWRELFLTHCLSFDVMGHIDGT------LLPTNANDVN-- 64
Query: 83 VPNPDYAYWYRVDQMLLSWLNATLT-EPILTQVLGLTSSKAVWDSLEKSFSSFNSARLMN 141
W + D ++ L TLT + + ++S+ +W ++ F + AR +
Sbjct: 65 --------WQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALR 116
Query: 142 LKLQLQTSKKGSLTISEFLLRLKGITDSLAAIGHPVSDDELVLIVLSGLGSEYEGFVTSI 201
L +L+T G + ++++ ++K + DSL + PV+D LV+ VL+GL +++ + I
Sbjct: 117 LDSELRTKDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVI 176
Query: 202 TTRLIPPTFSELHSQLLTHEFRLQLLHSSNP------QPTALYSQHPTPPVSTTPSYPTR 255
R P+F + + L E RL+ NP + + + PPV+ +
Sbjct: 177 KHRQPFPSFDDAATMLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPPVTNFQR--SG 234
Query: 256 GRGRGYASRGRGRGSFSGRS 275
G GY RGRG F GR
Sbjct: 235 GNQMGYRGRGRGNNIFRGRG 254