BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3180.1
(108 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G71430.1 | hypothetical protein | Chr1:26920564-26921058 FORW... 52 2e-09
>AT1G71430.1 | hypothetical protein | Chr1:26920564-26921058 FORWARD
LENGTH=164 | 201606
Length = 164
Score = 52.4 bits (124), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 27/29 (93%)
Query: 16 YDIEALTGKENEYIEMDLVLGVADLHTPE 44
Y+IEALTG E+E IEMDL+LGVADL+TPE
Sbjct: 84 YNIEALTGNESELIEMDLMLGVADLNTPE 112