BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g3190.1
(387 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 206 9e-59
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 206 9e-59
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 123 1e-32
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 58 3e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 206 bits (524), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 115/329 (34%), Positives = 193/329 (58%), Gaps = 7/329 (2%)
Query: 16 VCKLVKSLYGLKQAPKQWHLKFDQAMLSNGFKINECDKCVYTKVTAKGCVILCLYVDDML 75
VC L KS+YGLKQA +QW LKF ++ GF + D + K+TA + + +YVDD++
Sbjct: 229 VCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDII 288
Query: 76 IMGDNIDVIKTTKQMLSKNFDMKDLGRAEVILGIKISRSSYGIKLSQTHYVEKILEKFNK 135
I +N + K L F ++DLG + LG++I+RS+ GI + Q Y +L++
Sbjct: 289 ICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGL 348
Query: 136 NDMSLARTPIDPTVHLMKNR-GQGVNQLRYSQIIGSLMYLMNCTRPDIAYSVSKLSRFTS 194
+ P+DP+V + G V+ Y ++IG LMYL TR DI+++V+KLS+F+
Sbjct: 349 LGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYL-QITRLDISFAVNKLSQFSE 407
Query: 195 NPSKEHWTAIVRVLRYLRQTKEYGLLYTKYPEV-LEGYADANWISDTDDTKSTSGYVFTL 253
P H A++++L Y++ T GL Y+ E+ L+ ++DA++ S D +ST+GY L
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 254 GGAAISWKSSKQTCIARSTMDSEFIALDKAGEEAEWLRHFLKDIPI-WTKPVPAIKIHCD 312
G + ISWKS KQ +++S+ ++E+ AL A +E WL F +++ + +KP + CD
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPT---LLFCD 524
Query: 313 NQAAIARAHSKMYNGKSRHIRRRHNIVKQ 341
N AAI A + +++ +++HI + V++
Sbjct: 525 NTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 206 bits (524), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 115/329 (34%), Positives = 193/329 (58%), Gaps = 7/329 (2%)
Query: 16 VCKLVKSLYGLKQAPKQWHLKFDQAMLSNGFKINECDKCVYTKVTAKGCVILCLYVDDML 75
VC L KS+YGLKQA +QW LKF ++ GF + D + K+TA + + +YVDD++
Sbjct: 229 VCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDII 288
Query: 76 IMGDNIDVIKTTKQMLSKNFDMKDLGRAEVILGIKISRSSYGIKLSQTHYVEKILEKFNK 135
I +N + K L F ++DLG + LG++I+RS+ GI + Q Y +L++
Sbjct: 289 ICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGL 348
Query: 136 NDMSLARTPIDPTVHLMKNR-GQGVNQLRYSQIIGSLMYLMNCTRPDIAYSVSKLSRFTS 194
+ P+DP+V + G V+ Y ++IG LMYL TR DI+++V+KLS+F+
Sbjct: 349 LGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYL-QITRLDISFAVNKLSQFSE 407
Query: 195 NPSKEHWTAIVRVLRYLRQTKEYGLLYTKYPEV-LEGYADANWISDTDDTKSTSGYVFTL 253
P H A++++L Y++ T GL Y+ E+ L+ ++DA++ S D +ST+GY L
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467
Query: 254 GGAAISWKSSKQTCIARSTMDSEFIALDKAGEEAEWLRHFLKDIPI-WTKPVPAIKIHCD 312
G + ISWKS KQ +++S+ ++E+ AL A +E WL F +++ + +KP + CD
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPT---LLFCD 524
Query: 313 NQAAIARAHSKMYNGKSRHIRRRHNIVKQ 341
N AAI A + +++ +++HI + V++
Sbjct: 525 NTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 123 bits (308), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 119/224 (53%), Gaps = 2/224 (0%)
Query: 67 LCLYVDDMLIMGDNIDVIKTTKQMLSKNFDMKDLGRAEVILGIKISRSSYGIKLSQTHYV 126
L LYVDD+L+ G + ++ LS F MKDLG LGI+I G+ LSQT Y
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 127 EKILEKFNKNDMSLARTPIDPTVHLMKNRGQGVNQLRYSQIIGSLMYLMNCTRPDIAYSV 186
E+IL D TP+ ++ + + + + I+G+L YL TRPDI+Y+V
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYL-TLTRPDISYAV 121
Query: 187 SKLSRFTSNPSKEHWTAIVRVLRYLRQTKEYGLLYTKYPEV-LEGYADANWISDTDDTKS 245
+ + + P+ + + RVLRY++ T +GL K ++ ++ + D++W T +S
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 181
Query: 246 TSGYVFTLGGAAISWKSSKQTCIARSTMDSEFIALDKAGEEAEW 289
T+G+ LG ISW + +Q ++RS+ ++E+ AL E W
Sbjct: 182 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 57.8 bits (138), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 172 MYLMNCTRPDIAYSVSKLSRFTSNPSKEHWTAIVRVLRYLRQTKEYGLLYTKYPEV-LEG 230
MYL TRPD+ ++V++LS+F+S A+ +VL Y++ T GL Y+ ++ L+
Sbjct: 1 MYL-TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 59
Query: 231 YADANWISDTDDTKSTSGY 249
+AD++W S D +S +G+
Sbjct: 60 FADSDWASCPDTRRSVTGF 78